C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: doublecortin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000077279 DCX 9606 - X:111293780-111412375 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000338081 DCX-006 111293780-111411146 protein_coding
  ENST00000356220 DCX-004 111299904-111412187 protein_coding
  ENST00000358070 DCX-002 111293780-111410949 protein_coding
  ENST00000371993 DCX-201 111293783-111412191 protein_coding
  ENST00000468911 DCX-005 111410060-111411807 protein_coding
  ENST00000488120 DCX-001 111300608-111412375 protein_coding
  ENST00000496551 DCX-003 111330749-111412187 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000356220ENST00000358070ENST00000371993ENST00000468911ENST00000488120ENST00000496551
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000356220 N/A N/A N/A N/A 0.039±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000358070 N/A N/A N/A N/A N/A 0.003±0.00 0.003±0.00 N/A N/A 0.008±0.00 0.008±0.01 N/A
ENST00000371993 N/A 0.144±0.00 0.062±0.00 0.023±0.00 N/A 0.004±0.00 0.016±0.01 0.015±0.00 N/A 0.016±0.00 0.013±0.01 0.005±0.00
ENST00000468911 1.347±0.00 N/A N/A N/A N/A N/A N/A 0.620±0.00 N/A N/A N/A N/A
ENST00000488120 N/A N/A N/A N/A 0.021±0.00 N/A N/A N/A 0.165±0.00 N/A N/A N/A
ENST00000496551 N/A 1.613±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00068U CIL_00068U_0001 CGP X:111245103-111412375

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001764 IDA neuron migration
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0005856 TAS cytoskeleton
GO:0005874 IEA microtubule
GO:0005875 TAS microtubule associated complex
GO:0007399 TAS nervous system development
GO:0007411 TAS axon guidance
GO:0007417 TAS central nervous system development
GO:0007420 IEA brain development
GO:0008017 IDA microtubule binding
GO:0019901 IPI protein kinase binding
GO:0021952 IEA central nervous system projection neuron axonogenesis
GO:0035556 IEA intracellular signal transduction
GO:0043005 IDA neuron projection
GO:0048675 IEA axon extension
GO:0048813 IEA dendrite morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000031285 Dcx doublecortin protein_coding Mus_musculus

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