C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00068U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000077274-ENSG00000077279 CGP 9606 X:111245103-111412375
GeneTranscriptPositionBiotype
ENSG00000077274 (CAPN6)
calpain 6
ENST00000324068 (CAPN6-001) 111245103-111270523 protein_coding
CIL_00068U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000067276-ENSMUSG00000031285 CGP 10090 X:143802231-143933311
GeneTranscriptPositionBiotype
ENSMUSG00000031285 (Dcx)
doublecortin
ENSMUST00000033642 (Dcx-001) 143855842-143933311 protein_coding
ENSMUST00000087313 (Dcx-003) 143861782-143933124 protein_coding
ENSMUST00000112851 (Dcx-002) 143860711-143933204 protein_coding
ENSMUST00000112856 (Dcx-006) 143863473-143933219 protein_coding
ENSMUST00000125768 (Dcx-004) 143873752-143933119 retained_intron
ENSMUST00000139920 (Dcx-005) 143869210-143933050 retained_intron
ENSMUSG00000067276 (Capn6)
calpain 6
ENSMUST00000087316 (Capn6-001) 143802231-143827414 protein_coding
ENSMUST00000151154 (Capn6-002) 143816062-143827332 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00068U_0001ENSG00000077274ENST00000324068CIL_00068U_0002ENSMUSG00000031285ENSMUST00000033642ENSMUST00000087313ENSMUST00000112851ENSMUST00000112856ENSMUST00000125768ENSMUST00000139920ENSMUSG00000067276ENSMUST00000087316ENSMUST00000151154
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00068U_0001ENSG00000077274ENST00000324068CIL_00068U_0002ENSMUSG00000031285ENSMUST00000033642ENSMUST00000087313ENSMUST00000112851ENSMUST00000112856ENSMUST00000125768ENSMUST00000139920ENSMUSG00000067276ENSMUST00000087316
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000077274 ENST00000324068 0.100±0.00 0.759±0.00 0.359±0.00 N/A 2.897±1.15 1.020±0.29 0.023±0.00 1.826±1.81 0.235±0.11 0.268±0.07 0.221±0.07 1.157±1.02 76.694±19.12 5.966±5.71
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031285 ENSMUST00000033642 0.008±0.00 0.022±0.00 0.013±0.00 83.696±24.77 N/A 0.020±0.01 N/A 0.011±0.00 0.049±0.05 0.009±0.00 0.005±0.00 0.042±0.02 0.006±0.00 0.009±0.00
ENSMUST00000087313 0.007±0.00 N/A N/A N/A N/A N/A N/A N/A 0.020±0.00 0.014±0.00 N/A 0.157±0.00 N/A 0.014±0.01
ENSMUST00000112851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.092±0.02 N/A 0.016±0.00
ENSMUST00000112856 N/A 0.078±0.00 N/A N/A N/A 0.048±0.00 N/A 0.028±0.01 N/A N/A N/A N/A N/A 0.016±0.00
ENSMUST00000125768 N/A 0.106±0.04 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139920 N/A N/A N/A N/A N/A 0.043±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000067276 ENSMUST00000087316 1.832±1.56 0.104±0.06 2.427±0.08 2.045±1.30 0.511±0.29 0.428±0.13 0.438±0.06 0.680±0.10 5.036±5.02 1.039±0.18 0.752±0.20 1.202±0.29 2.983±1.56 2.266±0.97
ENSMUST00000151154 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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