C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: doublecortin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031285 Dcx 10090 - X:143855842-143933311 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033642 Dcx-001 143855842-143933311 protein_coding
  ENSMUST00000087313 Dcx-003 143861782-143933124 protein_coding
  ENSMUST00000112851 Dcx-002 143860711-143933204 protein_coding
  ENSMUST00000112856 Dcx-006 143863473-143933219 protein_coding
  ENSMUST00000125768 Dcx-004 143873752-143933119 retained_intron
  ENSMUST00000139920 Dcx-005 143869210-143933050 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033642ENSMUST00000087313ENSMUST00000112851ENSMUST00000112856ENSMUST00000125768ENSMUST00000139920
Transcript ID Adipose Adrenal Bladder Brain Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033642 0.008±0.00 0.022±0.00 0.013±0.00 83.696±24.77 0.020±0.01 0.011±0.00 0.049±0.05 0.009±0.00 0.005±0.00 0.042±0.02 0.006±0.00 0.009±0.00
ENSMUST00000087313 0.007±0.00 N/A N/A N/A N/A N/A 0.020±0.00 0.014±0.00 N/A 0.157±0.00 N/A 0.014±0.01
ENSMUST00000112851 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.092±0.02 N/A 0.016±0.00
ENSMUST00000112856 N/A 0.078±0.00 N/A N/A 0.048±0.00 0.028±0.01 N/A N/A N/A N/A N/A 0.016±0.00
ENSMUST00000125768 N/A 0.106±0.04 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139920 N/A N/A N/A N/A 0.043±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00068U CIL_00068U_0002 CGP X:143802231-143933311

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001764 IGI neuron migration
GO:0005515 IPI protein binding
GO:0005622 IDA intracellular
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0007420 IGI brain development
GO:0008017 ISS microtubule binding
GO:0019901 IEA protein kinase binding
GO:0021952 IGI central nervous system projection neuron axonogenesis
GO:0035556 IEA intracellular signal transduction
GO:0043005 ISS neuron projection
GO:0048675 IGI axon extension
GO:0048813 IGI dendrite morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000077279 DCX doublecortin protein_coding Homo_sapiens

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