C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: doublecortin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000488120 DCX-001 ENSG00000077279 9606 - X:111300608-111412375 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartMuscleENST00000488120
Transcript ID Heart Muscle
ENST00000488120 0.021±0.00 0.165±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00068U CIL_00068U_0001 CGP X:111245103-111412375

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001764 IDA neuron migration
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0005856 TAS cytoskeleton
GO:0005874 IEA microtubule
GO:0005875 TAS microtubule associated complex
GO:0007399 TAS nervous system development
GO:0007411 TAS axon guidance
GO:0007417 TAS central nervous system development
GO:0008017 IDA microtubule binding
GO:0019901 IPI protein kinase binding
GO:0035556 IEA intracellular signal transduction
GO:0043005 IDA neuron projection

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033642 Dcx-001 protein_coding Mus_musculus 0 2250
ENSMUST00000112851 Dcx-002 protein_coding Mus_musculus 0 2154
ENSMUST00000087313 Dcx-003 protein_coding Mus_musculus 0 1901
ENSMUST00000112856 Dcx-006 protein_coding Mus_musculus 0 1676
ENSMUST00000139920 Dcx-005 retained_intron Mus_musculus 0 1279
ENSMUST00000125768 Dcx-004 retained_intron Mus_musculus 0 1243

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