C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dynein, cytoplasmic 1, intermediate chain 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000077380 DYNC1I2 9606 + 2:171687409-171748420 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000340296 DYNC1I2-002 171687409-171748411 protein_coding
  ENST00000397119 DYNC1I2-001 171687470-171748409 protein_coding
  ENST00000409197 DYNC1I2-006 171687672-171748411 protein_coding
  ENST00000409317 DYNC1I2-005 171687708-171748011 protein_coding
  ENST00000409453 DYNC1I2-027 171687776-171748420 protein_coding
  ENST00000409773 DYNC1I2-004 171687744-171748416 protein_coding
  ENST00000410079 DYNC1I2-003 171687471-171747989 protein_coding
  ENST00000411953 DYNC1I2-020 171687755-171715350 protein_coding
  ENST00000412370 DYNC1I2-015 171688011-171715368 protein_coding
  ENST00000422646 DYNC1I2-019 171690145-171725677 protein_coding
  ENST00000423910 DYNC1I2-016 171688303-171725650 protein_coding
  ENST00000425485 DYNC1I2-018 171688303-171725946 protein_coding
  ENST00000430778 DYNC1I2-017 171688310-171712779 protein_coding
  ENST00000435234 DYNC1I2-013 171687881-171726913 protein_coding
  ENST00000438879 DYNC1I2-011 171687472-171725713 protein_coding
  ENST00000443458 DYNC1I2-014 171688006-171715351 protein_coding
  ENST00000445378 DYNC1I2-022 171687792-171725955 nonsense_mediated_decay
  ENST00000452242 DYNC1I2-021 171687409-171726081 protein_coding
  ENST00000456808 DYNC1I2-012 171687705-171725693 protein_coding
  ENST00000470286 DYNC1I2-024 171715390-171726852 retained_intron
  ENST00000471482 DYNC1I2-010 171687472-171693084 retained_intron
  ENST00000476551 DYNC1I2-025 171712402-171715376 retained_intron
  ENST00000479806 DYNC1I2-009 171726558-171748407 retained_intron
  ENST00000482454 DYNC1I2-007 171706890-171748409 retained_intron
  ENST00000508530 DYNC1I2-026 171687501-171748411 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000340296ENST00000409197ENST00000409317ENST00000409453ENST00000409773ENST00000410079ENST00000452242ENST00000456808ENST00000470286ENST00000479806ENST00000482454ENST00000508530
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000340296 N/A 2.461±0.00 1.779±0.00 N/A N/A 2.767±0.00 1.932±0.00 4.147±0.00 1.151±0.00 N/A 4.738±0.00 4.633±0.72 12.806±0.20 9.900±0.06
ENST00000409197 13.628±0.00 9.891±0.00 4.944±0.00 15.682±9.78 9.886±4.11 14.548±8.86 6.159±4.16 4.896±0.00 6.720±3.64 9.778±5.08 2.336±0.64 14.051±6.46 13.928±1.35 13.870±0.00
ENST00000409317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.370±0.00 11.241±0.00 N/A 15.890±0.00
ENST00000409453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.747±0.00
ENST00000409773 N/A N/A N/A 3.358±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000410079 N/A N/A N/A 3.924±0.00 4.321±0.00 N/A N/A N/A N/A 4.612±0.00 N/A 15.032±10.05 19.262±0.00 13.871±0.00
ENST00000452242 N/A N/A 4.844±0.00 6.337±0.00 N/A 5.436±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.494±0.00 N/A
ENST00000470286 N/A N/A N/A 20.934±0.00 23.920±0.00 17.465±0.00 6.091±0.00 9.488±0.00 17.716±0.00 16.558±0.00 N/A 28.034±0.00 N/A N/A
ENST00000479806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 31.356±0.00 N/A N/A
ENST00000482454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.685±0.00 N/A N/A N/A
ENST00000508530 4.039±0.00 2.258±0.00 N/A 9.504±0.00 N/A N/A 2.990±0.00 3.479±0.00 N/A 2.664±0.00 1.758±0.00 4.130±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PU CIL_0002PU_0001 CGP 2:171522247-171748420
CIL_0007RB CIL_0007RB_0001 VISTA 2:171663732-172264836
CIL_0008A7 CIL_0008A7_0001 VISTA 2:171663843-172264792
CIL_0007RB CIL_0007RB_0002 VISTA 2:171664837-172267307
CIL_00062P CIL_00062P_0002 CGP 2:171687409-171999859

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0003777 NAS microtubule motor activity
GO:0005515 IEA protein binding
GO:0005737 NAS cytoplasm
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0005868 IEA cytoplasmic dynein complex
GO:0005874 IDA microtubule
GO:0006810 IEA transport
GO:0007018 IEA:NAS microtubule-based movement
GO:0008152 IEA metabolic process
GO:0016032 IEA viral process
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0031982 IDA vesicle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005756 dync1i2a dynein, cytoplasmic 1, intermediate chain 2a protein_coding Danio_rerio
ENSDARG00000063383 dync1i2b dynein, cytoplasmic 1, intermediate chain 2b protein_coding Danio_rerio
ENSDARG00000078386 DYNC1I2 (3 of 3) dynein, cytoplasmic 1, intermediate chain 2 protein_coding Danio_rerio
ENSMUSG00000027012 Dync1i2 dynein cytoplasmic 1 intermediate chain 2 protein_coding Mus_musculus

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