C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dynein cytoplasmic 1 intermediate chain 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027012 Dync1i2 10090 + 2:71211706-71263303 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000081710 Dync1i2-001 71211834-71263303 protein_coding
  ENSMUST00000100028 Dync1i2-002 71211984-71262859 protein_coding
  ENSMUST00000112136 Dync1i2-009 71211992-71263303 protein_coding
  ENSMUST00000112138 Dync1i2-005 71211758-71263291 protein_coding
  ENSMUST00000112139 Dync1i2-006 71211741-71263294 protein_coding
  ENSMUST00000112140 Dync1i2-007 71211741-71263303 protein_coding
  ENSMUST00000112142 Dync1i2-003 71211706-71263298 protein_coding
  ENSMUST00000112144 Dync1i2-008 71211972-71263297 protein_coding
  ENSMUST00000137683 Dync1i2-010 71234799-71260349 retained_intron
  ENSMUST00000138613 Dync1i2-004 71260547-71263058 retained_intron
  ENSMUST00000141619 Dync1i2-012 71211806-71247019 processed_transcript
  ENSMUST00000149735 Dync1i2-011 71212004-71230541 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000081710ENSMUST00000100028ENSMUST00000112138ENSMUST00000112139ENSMUST00000112142ENSMUST00000112144ENSMUST00000141619
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000081710 3.264±0.00 2.010±0.88 14.850±0.16 N/A 2.759±0.53 2.219±0.54 2.468±0.66 3.259±0.36 6.103±4.29 3.604±0.68 7.846±1.46 4.475±2.12 8.931±3.48 7.452±1.32
ENSMUST00000100028 N/A 1.497±0.09 N/A 66.089±0.00 N/A 3.341±0.93 N/A N/A N/A N/A N/A 20.263±17.82 42.192±6.57 29.050±0.00
ENSMUST00000112138 18.065±2.78 5.086±1.36 18.920±2.46 N/A 10.414±3.07 8.486±2.17 10.123±0.43 13.642±2.87 10.197±2.23 17.127±2.44 6.634±1.22 15.416±14.60 24.464±4.35 23.147±0.40
ENSMUST00000112139 N/A N/A N/A N/A 3.227±0.00 2.751±0.94 2.540±0.00 N/A 1.637±0.50 N/A N/A 4.740±2.55 N/A N/A
ENSMUST00000112142 N/A 1.166±0.00 N/A 52.687±3.58 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112144 N/A N/A N/A 17.618±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.964±0.00 25.060±0.00 24.853±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PU CIL_0002PU_0002 CGP 2:71117923-71263303
CIL_0007RB CIL_0007RB_0003 VISTA 2:71118479-71722071
CIL_0008A7 CIL_0008A7_0002 VISTA 2:71118555-71719483
CIL_00062P CIL_00062P_0003 CGP 2:71211706-71367749

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0005813 IEA centrosome
GO:0005868 IEA cytoplasmic dynein complex
GO:0005874 IEA microtubule
GO:0006810 IEA transport
GO:0007018 IEA microtubule-based movement
GO:0008152 IEA metabolic process
GO:0031982 ISS vesicle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005756 dync1i2a dynein, cytoplasmic 1, intermediate chain 2a protein_coding Danio_rerio
ENSDARG00000063383 dync1i2b dynein, cytoplasmic 1, intermediate chain 2b protein_coding Danio_rerio
ENSDARG00000078386 DYNC1I2 (3 of 3) dynein, cytoplasmic 1, intermediate chain 2 protein_coding Danio_rerio
ENSG00000077380 DYNC1I2 dynein, cytoplasmic 1, intermediate chain 2 protein_coding Homo_sapiens

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