C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin-conjugating enzyme E2A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000077721 UBE2A 9606 + X:119574538-119584418 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000346330 UBE2A-002 119574677-119583463 protein_coding
  ENST00000371558 UBE2A-001 119574538-119584418 protein_coding
  ENST00000371569 UBE2A-003 119580335-119584418 retained_intron
  ENST00000469205 UBE2A-004 119574739-119575683 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000346330ENST00000371558ENST00000371569
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000346330 N/A N/A N/A N/A 3.448±0.00 4.484±0.00 3.632±0.00 N/A N/A 12.012±0.00 10.409±2.40 N/A N/A N/A
ENST00000371558 10.962±0.00 12.851±0.00 N/A 8.959±6.09 11.172±9.16 6.576±2.61 11.868±10.36 15.196±0.00 4.421±3.27 14.429±0.00 10.820±0.00 11.832±5.55 40.352±4.11 16.713±4.69
ENST00000371569 N/A 1.585±0.00 1.418±0.00 1.627±0.00 1.040±0.24 N/A 0.450±0.00 N/A N/A 3.561±0.00 1.111±0.00 1.664±0.59 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004S7 CIL_0004S7_0001 CGP X:119538149-119584418
CIL_0001UR CIL_0001UR_0001 CGP X:119574538-119605895

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000209 TAS protein polyubiquitination
GO:0000785 ISS chromatin
GO:0000790 IEA nuclear chromatin
GO:0001701 IEA in utero embryonic development
GO:0001741 IEA XY body
GO:0002474 TAS antigen processing and presentation of peptide antigen via MHC class I
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005829 TAS cytosol
GO:0006281 IGI DNA repair
GO:0006301 NAS postreplication repair
GO:0006511 NAS ubiquitin-dependent protein catabolic process
GO:0008284 IDA positive regulation of cell proliferation
GO:0009411 IGI response to UV
GO:0016881 IEA acid-amino acid ligase activity
GO:0031625 IPI ubiquitin protein ligase binding
GO:0033503 IDA HULC complex
GO:0033522 IDA histone H2A ubiquitination
GO:0051865 IDA protein autoubiquitination
GO:0060135 IEA maternal process involved in female pregnancy
GO:0070936 IDA protein K48-linked ubiquitination
GO:0070979 IDA protein K11-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053444 ube2a ubiquitin-conjugating enzyme E2A (RAD6 homolog) protein_coding Danio_rerio
ENSMUSG00000016308 Ube2a ubiquitin-conjugating enzyme E2A protein_coding Mus_musculus

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