C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004S7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000018610-ENSG00000077721 CGP 9606 X:119538149-119584418
GeneTranscriptPositionBiotype
ENSG00000018610 (CXorf56)
chromosome X open reading frame 56
ENST00000320339 (CXorf56-003) 119538149-119565373 protein_coding
ENST00000469448 (CXorf56-004) 119539570-119542767 processed_transcript
ENST00000536133 (CXorf56-201) 119538149-119565434 protein_coding
ENSG00000077721 (UBE2A)
ubiquitin-conjugating enzyme E2A
ENST00000346330 (UBE2A-002) 119574677-119583463 protein_coding
ENST00000371558 (UBE2A-001) 119574538-119584418 protein_coding
ENST00000371569 (UBE2A-003) 119580335-119584418 retained_intron
ENST00000469205 (UBE2A-004) 119574739-119575683 retained_intron
CIL_0004S7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000006423-ENSMUSG00000016308 CGP 10090 X:36823737-36884215
GeneTranscriptPositionBiotype
ENSMUSG00000006423 (C330007P06Rik)
RIKEN cDNA C330007P06 gene
ENSMUST00000047486 (C330007P06Rik-001) 36848550-36874111 protein_coding
ENSMUST00000115248 (C330007P06Rik-201) 36848543-36864246 protein_coding
ENSMUST00000115249 (C330007P06Rik-002) 36823737-36864238 protein_coding
ENSMUST00000127966 (C330007P06Rik-005) 36839658-36857012 retained_intron
ENSMUST00000143544 (C330007P06Rik-003) 36851135-36864173 processed_transcript
ENSMUST00000150873 (C330007P06Rik-004) 36856481-36864155 retained_intron
ENSMUSG00000016308 (Ube2a)
ubiquitin-conjugating enzyme E2A
ENSMUST00000016452 (Ube2a-001) 36874358-36884215 protein_coding
ENSMUSG00000084265 (Gm14541)
predicted gene 14541
ENSMUST00000118985 (Gm14541-001) 36839137-36839293 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004S7_0001ENSG00000018610ENST00000320339ENST00000469448ENST00000536133ENSG00000077721ENST00000346330ENST00000371558ENST00000371569ENST00000469205CIL_0004S7_0002ENSMUSG00000006423ENSMUST00000047486ENSMUST00000115248ENSMUST00000115249ENSMUST00000127966ENSMUST00000143544ENSMUST00000150873ENSMUSG00000016308ENSMUST00000016452ENSMUSG00000084265ENSMUST00000118985
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004S7_0001ENSG00000018610ENST00000320339ENST00000469448ENST00000536133ENSG00000077721ENST00000346330ENST00000371558ENST00000371569CIL_0004S7_0002ENSMUSG00000006423ENSMUST00000047486ENSMUST00000115248ENSMUST00000115249ENSMUST00000127966ENSMUST00000143544ENSMUST00000150873ENSMUSG00000016308ENSMUST00000016452ENSMUSG00000084265ENSMUST00000118985
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000018610 ENST00000320339 N/A 1.936±0.00 N/A N/A 1.406±0.00 0.510±0.00 N/A N/A N/A N/A N/A 1.334±0.33 N/A 1.238±0.00
ENST00000469448 3.925±0.00 6.603±0.00 N/A 7.167±0.00 3.659±2.00 2.878±0.00 1.976±0.00 N/A 0.713±0.00 N/A 1.420±0.00 2.217±0.00 N/A 5.099±0.00
ENST00000536133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.854±0.59 N/A N/A
ENSG00000077721 ENST00000346330 N/A N/A N/A N/A 3.448±0.00 4.484±0.00 3.632±0.00 N/A N/A 12.012±0.00 10.409±2.40 N/A N/A N/A
ENST00000371558 10.962±0.00 12.851±0.00 N/A 8.959±6.09 11.172±9.16 6.576±2.61 11.868±10.36 15.196±0.00 4.421±3.27 14.429±0.00 10.820±0.00 11.832±5.55 40.352±4.11 16.713±4.69
ENST00000371569 N/A 1.585±0.00 1.418±0.00 1.627±0.00 1.040±0.24 N/A 0.450±0.00 N/A N/A 3.561±0.00 1.111±0.00 1.664±0.59 N/A N/A
ENST00000469205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006423 ENSMUST00000047486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.563±0.25
ENSMUST00000115248 8.089±1.50 4.895±1.63 8.403±0.41 4.219±0.53 6.222±1.25 2.261±0.68 3.169±0.46 5.585±1.34 5.635±1.10 8.596±2.06 3.498±0.52 4.186±3.16 5.781±2.39 0.847±0.57
ENSMUST00000115249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.824±0.00
ENSMUST00000127966 0.873±0.00 1.836±0.00 N/A 0.697±0.00 0.632±0.00 0.551±0.11 N/A N/A N/A 0.858±0.00 N/A 0.981±0.17 N/A N/A
ENSMUST00000143544 13.069±2.65 N/A N/A N/A 8.457±2.98 6.911±3.18 3.782±0.38 8.189±0.61 4.589±0.48 9.790±2.11 N/A 7.271±1.85 N/A N/A
ENSMUST00000150873 N/A 5.836±1.11 N/A N/A N/A 7.656±0.00 N/A N/A 5.863±0.00 N/A N/A 9.376±0.00 N/A N/A
ENSMUSG00000016308 ENSMUST00000016452 8.945±0.76 19.557±1.67 13.097±1.13 10.840±0.83 11.543±2.12 14.498±2.01 9.780±0.45 9.855±1.31 9.434±2.03 10.261±1.28 9.633±0.59 8.432±1.19 29.228±9.19 4.168±1.86
ENSMUSG00000084265 ENSMUST00000118985 N/A N/A 2.594±0.00 12.307±0.00 N/A N/A N/A N/A N/A N/A 1.378±0.39 6.116±0.00 6.565±0.00 10.438±0.00

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