C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000346330 UBE2A-002 ENSG00000077721 9606 + X:119574677-119583463 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartLungMuscleENST00000346330
Transcript ID Breast Colon Heart Lung Muscle
ENST00000346330 3.448±0.00 4.484±0.00 3.632±0.00 12.012±0.00 10.409±2.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004S7 CIL_0004S7_0001 CGP X:119538149-119584418
CIL_0001UR CIL_0001UR_0001 CGP X:119574538-119605895

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000209 TAS protein polyubiquitination
GO:0000785 ISS chromatin
GO:0002474 TAS antigen processing and presentation of peptide antigen via MHC class I
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005829 TAS cytosol
GO:0006281 IGI DNA repair
GO:0006301 NAS postreplication repair
GO:0006511 NAS ubiquitin-dependent protein catabolic process
GO:0008284 IDA positive regulation of cell proliferation
GO:0009411 IGI response to UV
GO:0016881 IEA acid-amino acid ligase activity
GO:0031625 IPI ubiquitin protein ligase binding
GO:0033503 IDA HULC complex
GO:0033522 IDA histone H2A ubiquitination
GO:0051865 IDA protein autoubiquitination
GO:0070936 IDA protein K48-linked ubiquitination
GO:0070979 IDA protein K11-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000016452 Ube2a-001 protein_coding Mus_musculus 0 490

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