C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: grainyhead-like 2 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000083307 GRHL2 9606 + 8:101492432-101669726 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000251808 GRHL2-001 101492432-101669726 protein_coding
  ENST00000395927 GRHL2-002 101492758-101666893 protein_coding
  ENST00000472106 GRHL2-003 101492442-101544070 retained_intron
  ENST00000474338 GRHL2-004 101636770-101664501 retained_intron
  ENST00000517674 GRHL2-006 101632226-101664510 processed_transcript
  ENST00000521085 GRHL2-005 101492439-101492789 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000251808ENST00000395927ENST00000472106ENST00000474338ENST00000517674
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000251808 0.015±0.00 0.009±0.00 0.025±0.00 0.217±0.00 1.711±0.99 0.028±0.00 1.496±1.48 0.212±0.09 2.209±0.00 0.065±0.00 3.478±3.78 5.050±1.92 0.379±0.30
ENST00000395927 0.059±0.00 N/A N/A N/A N/A N/A 0.130±0.00 N/A N/A 0.156±0.00 1.743±0.00 N/A N/A
ENST00000472106 N/A 0.146±0.00 0.129±0.09 N/A N/A 0.080±0.00 N/A 1.302±0.00 N/A 0.011±0.00 N/A N/A N/A
ENST00000474338 N/A N/A N/A N/A N/A N/A 0.713±0.00 N/A N/A N/A N/A N/A N/A
ENST00000517674 0.121±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088H CIL_00088H_0001 VISTA 8:100960984-101568585
CIL_000532 CIL_000532_0002 CGP 8:101177878-101669726
CIL_0004T4 CIL_0004T4_0002 CGP 8:101492432-102124907

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001701 IEA in utero embryonic development
GO:0001843 IEA neural tube closure
GO:0003208 IEA cardiac ventricle morphogenesis
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007420 IEA brain development
GO:0010468 IEA regulation of gene expression
GO:0021915 IEA neural tube development
GO:0030323 IEA respiratory tube development
GO:0035264 IEA multicellular organism growth
GO:0042733 IEA embryonic digit morphogenesis
GO:0043010 IEA camera-type eye development
GO:0048568 IEA embryonic organ development
GO:0048701 IEA embryonic cranial skeleton morphogenesis
GO:0060324 IEA face development
GO:0060463 IEA lung lobe morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058342 grhl2a grainyhead-like 2a (Drosophila) protein_coding Danio_rerio
ENSDARG00000061974 grhl2b grainyhead-like 2b (Drosophila) protein_coding Danio_rerio
ENSMUSG00000022286 Grhl2 grainyhead-like 2 (Drosophila) protein_coding Mus_musculus

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