C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: grainyhead-like 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000251808 GRHL2-001 ENSG00000083307 9606 + 8:101492432-101669726 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000251808
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000251808 0.015±0.00 0.009±0.00 0.025±0.00 0.217±0.00 1.711±0.99 0.028±0.00 1.496±1.48 0.212±0.09 2.209±0.00 0.065±0.00 3.478±3.78 5.050±1.92 0.379±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088H CIL_00088H_0001 VISTA 8:100960984-101568585
CIL_000532 CIL_000532_0002 CGP 8:101177878-101669726
CIL_0004T4 CIL_0004T4_0002 CGP 8:101492432-102124907

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IEA in utero embryonic development
GO:0001843 IEA neural tube closure
GO:0003208 IEA cardiac ventricle morphogenesis
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007420 IEA brain development
GO:0010468 IEA regulation of gene expression
GO:0021915 IEA neural tube development
GO:0030323 IEA respiratory tube development
GO:0035264 IEA multicellular organism growth
GO:0042733 IEA embryonic digit morphogenesis
GO:0043010 IEA camera-type eye development
GO:0048568 IEA embryonic organ development
GO:0048701 IEA embryonic cranial skeleton morphogenesis
GO:0060324 IEA face development
GO:0060463 IEA lung lobe morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022895 Grhl2-001 protein_coding Mus_musculus 0 2916
ENSMUST00000161405 Grhl2-002 protein_coding Mus_musculus 0 2078
ENSMUST00000161933 Grhl2-003 processed_transcript Mus_musculus 0 1027
ENSMUST00000161532 Grhl2-004 protein_coding Mus_musculus 0 584
ENSMUST00000159221 Grhl2-005 protein_coding Mus_musculus 3e-39 169
ENSDART00000088986 grhl2a-201 protein_coding Danio_rerio 5e-37 161
ENSDART00000148528 grhl2a-002 protein_coding Danio_rerio 5e-37 161

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