C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00088H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm31 VISTA 9606 8:100960984-101568585
GeneTranscriptPositionBiotype
ENSG00000083307 (GRHL2)
grainyhead-like 2 (Drosophila) 		ENST00000251808 (GRHL2-001) 101492432-101669726 protein_coding
ENST00000395927 (GRHL2-002) 101492758-101666893 protein_coding
ENST00000472106 (GRHL2-003) 101492442-101544070 retained_intron
ENST00000474338 (GRHL2-004) 101636770-101664501 retained_intron
ENST00000517674 (GRHL2-006) 101632226-101664510 processed_transcript
ENST00000521085 (GRHL2-005) 101492439-101492789 protein_coding
ENSG00000120963 (ZNF706)
zinc finger protein 706 		ENST00000311212 (ZNF706-001) 101197052-101205616 protein_coding
ENST00000517844 (ZNF706-006) 101198933-101204701 protein_coding
ENST00000518071 (ZNF706-012) 101177997-101200093 nonsense_mediated_decay
ENST00000518336 (ZNF706-014) 101199195-101206064 protein_coding
ENST00000519103 (ZNF706-007) 101198937-101201657 protein_coding
ENST00000519744 (ZNF706-010) 101198726-101205568 protein_coding
ENST00000519882 (ZNF706-003) 101198939-101205732 protein_coding
ENST00000519916 (ZNF706-008) 101201220-101205507 retained_intron
ENST00000520347 (ZNF706-002) 101198938-101205287 protein_coding
ENST00000520454 (ZNF706-013) 101201716-101206193 protein_coding
ENST00000520498 (ZNF706-009) 101198924-101200288 retained_intron
ENST00000520984 (ZNF706-011) 101177878-101205461 protein_coding
ENST00000521272 (ZNF706-004) 101199160-101205682 protein_coding
ENST00000523146 (ZNF706-015) 101200036-101205474 nonsense_mediated_decay
ENST00000523922 (ZNF706-005) 101201615-101205329 protein_coding
ENSG00000202360 (RN7SKP249)
RNA, 7SK small nuclear pseudogene 249 		ENST00000365490 (RN7SKP249-201) 101137959-101138313 misc_RNA
ENSG00000228224 (NACAP1)
nascent-polypeptide-associated complex alpha polypeptide pseudogene 1 		ENST00000419462 (NACAP1-001) 101361794-101372707 processed_transcript
ENST00000519039 (NACAP1-002) 101368910-101369550 transcribed_processed_pseudogene
ENSG00000239211 (RN7SL563P)
RNA, 7SL, cytoplasmic 563, pseudogene 		ENST00000481233 (RN7SL563P-201) 101397636-101397933 misc_RNA
ENSG00000248599 (FLJ42969)
uncharacterized LOC441374 		ENST00000514926 (FLJ42969-001) 101052054-101076251 lincRNA
ENSG00000253153 (KB-1562D12.3)
 ENST00000524051 (KB-1562D12.3-001) 101562008-101562488 processed_pseudogene
ENSG00000253282 (KB-1410C5.3)
 ENST00000524287 (KB-1410C5.3-001) 101287445-101293783 lincRNA
ENSG00000253355 (KB-1460A1.2)
 ENST00000520411 (KB-1460A1.2-002) 101128987-101133245 retained_intron
ENST00000521884 (KB-1460A1.2-001) 101128994-101133486 lincRNA
ENSG00000253395 (KB-1460A1.1)
 ENST00000524369 (KB-1460A1.1-001) 101122145-101126158 lincRNA
ENSG00000253644 (KB-1930G5.3)
 ENST00000518612 (KB-1930G5.3-001) 101387299-101393186 lincRNA
ENSG00000253679 (KB-1410C5.2)
 ENST00000523121 (KB-1410C5.2-001) 101261541-101262903 lincRNA
ENSG00000253737 (KB-1460A1.3)
 ENST00000518090 (KB-1460A1.3-001) 101139665-101140929 lincRNA
ENSG00000253942 (KB-1410C5.1)
 ENST00000520123 (KB-1410C5.1-001) 101223941-101224573 processed_pseudogene
ENSG00000253991 (KB-1562D12.2)
 ENST00000519490 (KB-1562D12.2-001) 101528723-101529569 processed_pseudogene
ENSG00000254063 (DUXAP2)
double homeobox A pseudogene 2 		ENST00000519198 (DUXAP2-001) 101366417-101367005 unprocessed_pseudogene
ENSG00000261087 (KB-1460A1.5)
 ENST00000565617 (KB-1460A1.5-001) 101166805-101169629 lincRNA
ENSG00000271560 (KB-1410C5.4)
 ENST00000604350 (KB-1410C5.4-001) 101337496-101337649 processed_pseudogene
ENSG00000271882 (KB-1410C5.5)
 ENST00000607176 (KB-1410C5.5-001) 101208148-101208558 lincRNA
CIL_00088H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm31 VISTA 10090 15:36752172-37355037
GeneTranscriptPositionBiotype
ENSMUSG00000022285 (Ywhaz)
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 		ENSMUST00000022894 (Ywhaz-002) 36770770-36794538 protein_coding
ENSMUST00000110359 (Ywhaz-004) 36790899-36794547 protein_coding
ENSMUST00000110361 (Ywhaz-001) 36771569-36794531 protein_coding
ENSMUST00000110362 (Ywhaz-003) 36771704-36793837 protein_coding
ENSMUST00000126184 (Ywhaz-006) 36790712-36792414 protein_coding
ENSMUST00000151635 (Ywhaz-005) 36790844-36793210 protein_coding
ENSMUST00000154879 (Ywhaz-007) 36775045-36793519 retained_intron
ENSMUSG00000022286 (Grhl2)
grainyhead-like 2 (Drosophila) 		ENSMUST00000022895 (Grhl2-001) 37233036-37363569 protein_coding
ENSMUST00000159221 (Grhl2-005) 37335737-37360940 protein_coding
ENSMUST00000161405 (Grhl2-002) 37233036-37333647 protein_coding
ENSMUST00000161532 (Grhl2-004) 37233058-37279553 protein_coding
ENSMUST00000161933 (Grhl2-003) 37318403-37363562 processed_transcript
ENSMUSG00000062397 (Zfp706)
zinc finger protein 706 		ENSMUST00000078976 (Zfp706-201) 36997031-37007402 protein_coding
ENSMUSG00000072618 (Gm10384)
predicted gene 10384 		ENSMUST00000100713 (Gm10384-201) 36870501-36879816 protein_coding
ENSMUSG00000089804 (Gm16136)
predicted gene 16136 		ENSMUST00000159411 (Gm16136-003) 37232655-37233141 antisense
ENSMUST00000160264 (Gm16136-001) 37231939-37233309 antisense
ENSMUST00000162520 (Gm16136-002) 37231921-37233159 antisense
ENSMUSG00000089811 (Gm16138)
predicted gene 16138 		ENSMUST00000159341 (Gm16138-001) 37331989-37332666 processed_pseudogene
ENSMUSG00000089949 (Gm16137)
predicted gene 16137 		ENSMUST00000161571 (Gm16137-001) 37242403-37243162 sense_intronic
ENSMUSG00000097259 (Gm26766)
predicted gene, 26766 		ENSMUST00000181411 (Gm26766-201) 37007523-37044100 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00088H_0001ENSG00000083307ENST00000251808ENST00000395927ENST00000472106ENST00000474338ENST00000517674ENST00000521085ENSG00000120963ENST00000311212ENST00000517844ENST00000518071ENST00000518336ENST00000519103ENST00000519744ENST00000519882ENST00000519916ENST00000520347ENST00000520454ENST00000520498ENST00000520984ENST00000521272ENST00000523146ENST00000523922ENSG00000202360ENST00000365490ENSG00000228224ENST00000419462ENST00000519039ENSG00000239211ENST00000481233ENSG00000248599ENST00000514926ENSG00000253153ENST00000524051ENSG00000253282ENST00000524287ENSG00000253355ENST00000520411ENST00000521884ENSG00000253395ENST00000524369ENSG00000253644ENST00000518612ENSG00000253679ENST00000523121ENSG00000253737ENST00000518090ENSG00000253942ENST00000520123ENSG00000253991ENST00000519490ENSG00000254063ENST00000519198ENSG00000261087ENST00000565617ENSG00000271560ENST00000604350ENSG00000271882ENST00000607176CIL_00088H_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00088H_0001ENSG00000083307ENST00000251808ENST00000395927ENST00000472106ENST00000474338ENST00000517674ENSG00000120963ENST00000311212ENST00000517844ENST00000518336ENST00000519744ENST00000519882ENST00000520347ENST00000520984ENST00000521272ENSG00000202360ENST00000365490ENSG00000228224ENST00000419462ENST00000519039ENSG00000239211ENST00000481233ENSG00000248599ENST00000514926ENSG00000253153ENST00000524051ENSG00000253282ENST00000524287ENSG00000253355ENST00000520411ENST00000521884ENSG00000253395ENST00000524369ENSG00000253644ENST00000518612ENSG00000253679ENST00000523121ENSG00000253737ENST00000518090ENSG00000253942ENST00000520123ENSG00000253991ENST00000519490ENSG00000254063ENST00000519198ENSG00000261087ENST00000565617ENSG00000271560ENST00000604350ENSG00000271882ENST00000607176CIL_00088H_0002ENSMUSG00000022285ENSMUST00000022894ENSMUST00000110361ENSMUST00000110362ENSMUSG00000022286ENSMUST00000022895ENSMUST00000159221ENSMUST00000161405ENSMUST00000161532ENSMUST00000161933ENSMUSG00000062397ENSMUST00000078976ENSMUSG00000072618ENSMUST00000100713ENSMUSG00000089804ENSMUST00000159411ENSMUST00000160264ENSMUST00000162520ENSMUSG00000089811ENSMUST00000159341ENSMUSG00000089949ENSMUST00000161571ENSMUSG00000097259ENSMUST00000181411
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000083307 ENST00000251808 0.015±0.00 0.009±0.00 N/A 0.025±0.00 0.217±0.00 1.711±0.99 0.028±0.00 1.496±1.48 0.212±0.09 2.209±0.00 0.065±0.00 3.478±3.78 5.050±1.92 0.379±0.30
ENST00000395927 0.059±0.00 N/A N/A N/A N/A N/A N/A 0.130±0.00 N/A N/A 0.156±0.00 1.743±0.00 N/A N/A
ENST00000472106 N/A 0.146±0.00 N/A 0.129±0.09 N/A N/A 0.080±0.00 N/A 1.302±0.00 N/A 0.011±0.00 N/A N/A N/A
ENST00000474338 N/A N/A N/A N/A N/A N/A N/A 0.713±0.00 N/A N/A N/A N/A N/A N/A
ENST00000517674 0.121±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000120963 ENST00000311212 2.803±0.00 2.547±0.00 0.698±0.00 6.201±3.66 2.874±0.64 2.983±0.97 1.373±0.44 2.257±0.05 0.962±0.08 2.639±0.59 1.086±0.64 4.591±1.48 2.455±0.28 2.369±1.04
ENST00000517844 N/A N/A N/A N/A N/A N/A 4.782±0.00 N/A N/A N/A 4.669±1.72 25.627±10.06 20.288±10.84 N/A
ENST00000518071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.787±0.00
ENST00000519103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.776±0.00 N/A
ENST00000519882 15.141±0.00 15.882±0.00 N/A N/A 21.833±0.00 13.475±0.00 10.457±0.00 9.005±0.00 16.590±0.00 25.930±0.00 8.090±0.00 N/A 5.383±0.00 15.864±0.00
ENST00000519916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520347 N/A 2.092±0.00 N/A 2.165±0.00 1.054±0.00 N/A N/A 0.735±0.03 N/A N/A 0.450±0.00 1.591±0.63 N/A 2.083±0.00
ENST00000520454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520984 N/A N/A 0.935±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521272 N/A N/A N/A N/A N/A N/A N/A 9.109±0.00 N/A N/A N/A 43.153±0.00 19.001±0.00 12.372±0.00
ENST00000523146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000202360 ENST00000365490 N/A 0.049±0.00 N/A N/A 0.099±0.00 N/A N/A N/A N/A N/A N/A N/A 0.195±0.00 N/A
ENSG00000228224 ENST00000419462 0.112±0.00 0.144±0.00 N/A 0.065±0.00 0.125±0.00 0.050±0.00 0.049±0.00 0.014±0.00 N/A 0.166±0.00 0.086±0.00 0.844±0.00 0.127±0.09 0.356±0.14
ENST00000519039 N/A N/A N/A N/A N/A 0.102±0.00 N/A 0.009±0.00 N/A N/A 0.062±0.00 0.704±0.00 0.130±0.00 2.904±0.00
ENSG00000239211 ENST00000481233 0.063±0.00 0.067±0.00 N/A N/A N/A N/A N/A 0.281±0.00 N/A N/A N/A 0.238±0.00 N/A 0.062±0.00
ENSG00000248599 ENST00000514926 N/A N/A N/A 0.047±0.00 0.022±0.00 0.025±0.00 0.119±0.09 N/A N/A N/A N/A 0.057±0.00 0.083±0.04 0.103±0.00
ENSG00000253153 ENST00000524051 N/A N/A N/A N/A 1.022±0.00 0.166±0.00 N/A N/A 0.102±0.00 0.283±0.00 N/A 0.458±0.00 0.031±0.00 N/A
ENSG00000253282 ENST00000524287 0.234±0.00 0.570±0.00 N/A 0.460±0.00 0.156±0.00 0.182±0.00 0.221±0.00 0.276±0.00 0.223±0.00 0.174±0.00 0.017±0.00 0.256±0.00 N/A 0.217±0.11
ENSG00000253355 ENST00000520411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.238±0.21
ENST00000521884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.647±0.00
ENSG00000253395 ENST00000524369 0.131±0.00 0.367±0.00 N/A 0.251±0.00 0.189±0.00 N/A 0.129±0.00 N/A N/A N/A 1.096±0.00 0.954±0.10 0.284±0.00 0.042±0.00
ENSG00000253644 ENST00000518612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.288±0.06
ENSG00000253679 ENST00000523121 0.075±0.00 0.076±0.00 N/A 0.033±0.00 0.076±0.00 0.070±0.00 N/A 0.015±0.00 N/A 0.013±0.00 N/A 0.014±0.00 0.096±0.05 9.904±3.99
ENSG00000253737 ENST00000518090 N/A N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A 0.107±0.00 0.388±0.30
ENSG00000253942 ENST00000520123 N/A N/A N/A 0.140±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253991 ENST00000519490 N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A N/A N/A N/A 0.039±0.00 N/A N/A
ENSG00000254063 ENST00000519198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.168±0.00
ENSG00000261087 ENST00000565617 0.796±0.00 0.962±0.00 1.693±0.00 2.840±1.93 0.761±0.23 1.923±0.62 0.718±0.03 0.909±0.35 0.998±0.83 1.561±0.66 2.103±0.35 1.763±0.52 0.161±0.02 0.694±0.52
ENSG00000271560 ENST00000604350 N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.00 N/A 0.085±0.00 N/A N/A N/A
ENSG00000271882 ENST00000607176 0.567±0.00 0.255±0.00 1.273±0.00 0.344±0.00 1.092±0.60 0.101±0.00 0.129±0.00 1.162±0.64 0.676±0.00 0.252±0.00 N/A 0.940±0.80 0.304±0.12 0.328±0.24
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022285 ENSMUST00000022894 22.903±2.81 19.926±2.34 27.405±11.97 97.445±52.56 23.453±9.12 34.312±4.88 11.184±0.82 28.752±4.68 27.248±24.13 29.210±8.31 2.363±0.91 37.272±17.60 41.066±34.62 8.511±3.80
ENSMUST00000110359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.809±0.00
ENSMUST00000110362 N/A N/A N/A 89.602±0.00 N/A N/A N/A N/A N/A N/A 2.178±0.10 32.658±15.05 44.552±21.85 27.649±8.87
ENSMUST00000126184 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000022286 ENSMUST00000022895 1.305±0.83 0.029±0.00 5.639±0.15 0.110±0.01 1.553±0.68 5.013±2.29 0.047±0.00 1.266±0.33 0.026±0.02 3.440±0.53 N/A 1.974±1.12 4.451±2.27 N/A
ENSMUST00000159221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.605±0.00
ENSMUST00000161405 0.588±0.57 0.051±0.00 N/A N/A 0.636±0.00 3.629±0.72 N/A N/A 0.023±0.00 N/A N/A 1.123±0.35 4.699±0.00 N/A
ENSMUST00000161532 0.041±0.00 N/A N/A N/A N/A N/A N/A N/A 0.037±0.00 N/A 0.104±0.00 4.541±0.00 N/A N/A
ENSMUST00000161933 0.009±0.00 0.020±0.00 N/A N/A 1.064±0.00 N/A 0.464±0.05 N/A 0.020±0.01 N/A 0.020±0.01 0.756±0.33 1.706±0.79 0.828±0.56
ENSMUSG00000062397 ENSMUST00000078976 19.712±5.72 84.571±25.24 12.921±1.79 18.875±6.19 31.285±11.90 49.391±2.48 15.383±2.25 39.288±2.23 16.129±6.83 30.275±5.98 6.077±2.80 41.289±18.13 17.067±5.99 7.180±2.16
ENSMUSG00000072618 ENSMUST00000100713 0.270±0.07 0.165±0.04 0.096±0.01 0.038±0.03 0.209±0.13 0.927±0.22 0.035±0.02 0.051±0.03 0.259±0.14 0.145±0.11 0.017±0.00 0.350±0.24 0.094±0.03 0.065±0.06
ENSMUSG00000089804 ENSMUST00000159411 N/A 0.210±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160264 0.093±0.00 N/A 27.645±10.34 N/A N/A N/A N/A N/A 0.016±0.00 N/A 0.052±0.00 3.214±0.00 6.881±3.50 N/A
ENSMUST00000162520 N/A N/A 16.057±0.00 N/A N/A N/A N/A N/A 0.081±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000089811 ENSMUST00000159341 0.317±0.00 N/A 0.197±0.10 0.035±0.02 0.266±0.14 0.319±0.08 0.055±0.00 0.169±0.10 N/A 0.135±0.06 N/A 0.328±0.17 0.108±0.04 N/A
ENSMUSG00000089949 ENSMUST00000161571 N/A N/A 0.102±0.06 N/A 0.130±0.05 0.329±0.15 N/A 0.060±0.00 N/A 0.171±0.08 N/A 0.195±0.03 0.083±0.02 0.264±0.15
ENSMUSG00000097259 ENSMUST00000181411 0.014±0.00 0.037±0.00 N/A 0.012±0.00 0.010±0.00 N/A 0.007±0.00 0.007±0.00 0.005±0.00 0.014±0.00 N/A 0.036±0.02 0.023±0.01 0.057±0.03

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