C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: grainyhead-like 2 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022286 Grhl2 10090 + 15:37233036-37363569 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022895 Grhl2-001 37233036-37363569 protein_coding
  ENSMUST00000159221 Grhl2-005 37335737-37360940 protein_coding
  ENSMUST00000161405 Grhl2-002 37233036-37333647 protein_coding
  ENSMUST00000161532 Grhl2-004 37233058-37279553 protein_coding
  ENSMUST00000161933 Grhl2-003 37318403-37363562 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022895ENSMUST00000159221ENSMUST00000161405ENSMUST00000161532ENSMUST00000161933
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022895 1.305±0.83 0.029±0.00 5.639±0.15 0.110±0.01 1.553±0.68 5.013±2.29 0.047±0.00 1.266±0.33 0.026±0.02 3.440±0.53 N/A 1.974±1.12 4.451±2.27 N/A
ENSMUST00000159221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.605±0.00
ENSMUST00000161405 0.588±0.57 0.051±0.00 N/A N/A 0.636±0.00 3.629±0.72 N/A N/A 0.023±0.00 N/A N/A 1.123±0.35 4.699±0.00 N/A
ENSMUST00000161532 0.041±0.00 N/A N/A N/A N/A N/A N/A N/A 0.037±0.00 N/A 0.104±0.00 4.541±0.00 N/A N/A
ENSMUST00000161933 0.009±0.00 0.020±0.00 N/A N/A 1.064±0.00 N/A 0.464±0.05 N/A 0.020±0.01 N/A 0.020±0.01 0.756±0.33 1.706±0.79 0.828±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088H CIL_00088H_0002 VISTA 15:36752172-37355037
CIL_000532 CIL_000532_0003 CGP 15:36997031-37363569
CIL_0004T4 CIL_0004T4_0003 CGP 15:37233036-37792570

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0001843 IMP neural tube closure
GO:0003208 IMP cardiac ventricle morphogenesis
GO:0003677 ISA:IDA DNA binding
GO:0003700 ISA:IDA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 ISA:IDA regulation of transcription, DNA-templated
GO:0007420 IMP brain development
GO:0010468 IMP regulation of gene expression
GO:0021915 IMP neural tube development
GO:0030323 IMP respiratory tube development
GO:0035264 IMP multicellular organism growth
GO:0042733 IMP embryonic digit morphogenesis
GO:0043010 IMP camera-type eye development
GO:0048568 IMP embryonic organ development
GO:0048701 IMP embryonic cranial skeleton morphogenesis
GO:0060324 IMP face development
GO:0060463 IMP lung lobe morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058342 grhl2a grainyhead-like 2a (Drosophila) protein_coding Danio_rerio
ENSDARG00000061974 grhl2b grainyhead-like 2b (Drosophila) protein_coding Danio_rerio
ENSG00000083307 GRHL2 grainyhead-like 2 (Drosophila) protein_coding Homo_sapiens

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