C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SEH1-like (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000085415 SEH1L 9606 + 18:12947133-12987536 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262124 SEH1L-001 12947995-12987536 protein_coding
  ENST00000399892 SEH1L-002 12948021-12987536 protein_coding
  ENST00000585730 SEH1L-007 12948014-12971252 protein_coding
  ENST00000587761 SEH1L-008 12948048-12978860 protein_coding
  ENST00000588251 SEH1L-009 12948505-12971249 processed_transcript
  ENST00000589446 SEH1L-006 12948036-12971251 protein_coding
  ENST00000590032 SEH1L-010 12978829-12983217 retained_intron
  ENST00000590843 SEH1L-004 12976288-12987531 retained_intron
  ENST00000592170 SEH1L-005 12947133-12955610 protein_coding
  ENST00000592582 SEH1L-003 12971563-12985718 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262124ENST00000399892ENST00000585730ENST00000587761ENST00000589446ENST00000590843ENST00000592582
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262124 6.311±0.00 3.856±0.00 1.382±0.00 4.414±2.50 2.069±0.00 2.763±0.66 0.495±0.30 1.849±0.00 2.394±0.89 2.241±1.26 N/A 4.579±1.42 3.101±0.80 2.206±0.38
ENST00000399892 4.203±0.00 8.821±0.00 4.416±0.00 8.077±4.62 6.406±0.81 5.728±1.51 2.764±1.65 3.400±1.85 3.716±0.63 4.746±0.04 9.153±6.90 8.389±3.36 4.015±1.32 5.850±0.88
ENST00000585730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.796±0.00 N/A N/A N/A
ENST00000587761 N/A N/A N/A N/A N/A N/A 0.607±0.00 N/A 3.162±0.00 N/A N/A N/A N/A N/A
ENST00000589446 N/A N/A 6.243±0.00 N/A 9.150±0.00 N/A N/A 7.341±0.00 3.980±0.00 N/A N/A N/A N/A N/A
ENST00000590843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.279±0.00 N/A N/A N/A
ENST00000592582 N/A N/A N/A N/A N/A N/A 0.161±0.00 N/A 0.503±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00068W CIL_00068W_0001 CGP 18:12785478-12987536
CIL_0005NY CIL_0005NY_0001 CGP 18:12947133-13125052

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000776 IDA kinetochore
GO:0002534 IEA cytokine production involved in inflammatory response
GO:0005515 IEA protein binding
GO:0005635 TAS nuclear envelope
GO:0005829 TAS cytosol
GO:0005975 TAS carbohydrate metabolic process
GO:0006999 IMP nuclear pore organization
GO:0007077 TAS mitotic nuclear envelope disassembly
GO:0007080 IMP mitotic metaphase plate congression
GO:0008645 TAS hexose transport
GO:0010827 TAS regulation of glucose transport
GO:0015031 IEA protein transport
GO:0015758 TAS glucose transport
GO:0016032 TAS viral process
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0031080 NAS nuclear pore outer ring
GO:0044281 TAS small molecule metabolic process
GO:0050830 IEA defense response to Gram-positive bacterium
GO:0051028 IEA mRNA transport
GO:0051315 IMP attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004280 seh1l SEH1-like (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000079614 Seh1l SEH1-like (S. cerevisiae protein_coding Mus_musculus

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