C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SEH1-like (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262124 SEH1L-001 ENSG00000085415 9606 + 18:12947995-12987536 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000262124
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000262124 6.311±0.00 3.856±0.00 1.382±0.00 4.414±2.50 2.069±0.00 2.763±0.66 0.495±0.30 1.849±0.00 2.394±0.89 2.241±1.26 4.579±1.42 3.101±0.80 2.206±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00068W CIL_00068W_0001 CGP 18:12785478-12987536
CIL_0005NY CIL_0005NY_0001 CGP 18:12947133-13125052

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000776 IDA kinetochore
GO:0005515 IEA protein binding
GO:0005635 TAS nuclear envelope
GO:0005829 TAS cytosol
GO:0005975 TAS carbohydrate metabolic process
GO:0006999 IMP nuclear pore organization
GO:0007077 TAS mitotic nuclear envelope disassembly
GO:0007080 IMP mitotic metaphase plate congression
GO:0008645 TAS hexose transport
GO:0010827 TAS regulation of glucose transport
GO:0015031 IEA protein transport
GO:0015758 TAS glucose transport
GO:0016032 TAS viral process
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0031080 NAS nuclear pore outer ring
GO:0044281 TAS small molecule metabolic process
GO:0051028 IEA mRNA transport
GO:0051315 IMP attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025421 Seh1l-201 protein_coding Mus_musculus 0 1712
ENSMUST00000121283 Gm15780-001 processed_pseudogene Mus_musculus 0 628

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