C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAD54-like (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371975 RAD54L-001 ENSG00000085999 9606 + 1:46247732-46278472 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000636 CIL_000636_0002 CGP 1:46247688-46303608

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000724 IEA double-strand break repair via homologous recombination
GO:0000733 IDA DNA strand renaturation
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0004386 IEA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0006281 TAS DNA repair
GO:0006302 IEA double-strand break repair
GO:0006310 TAS DNA recombination
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0007126 TAS meiotic nuclear division
GO:0010212 IEA response to ionizing radiation
GO:0016787 IEA hydrolase activity
GO:0016817 IEA hydrolase activity, acting on acid anhydrides
GO:0036310 IDA annealing helicase activity
GO:0042493 IEA response to drug
GO:0051276 IEA chromosome organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102704 Rad54l-001 protein_coding Mus_musculus 0 3059
ENSMUST00000102705 Rad54l-002 protein_coding Mus_musculus 0 3059
ENSMUST00000139147 Rad54l-004 processed_transcript Mus_musculus 0 1011
ENSMUST00000152741 Rad54l-006 processed_transcript Mus_musculus 0 481
ENSMUST00000143089 Rad54l-003 processed_transcript Mus_musculus 0 259
ENSMUST00000030471 Lrrc41-001 protein_coding Mus_musculus 3e-17 95

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