C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_000636_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000018623-ENSDARG00000096306 CGP 7955 6:3280974-3314225
GeneTranscriptPositionBiotype
ENSDARG00000018623 (rad54l)
RAD54-like (S. cerevisiae)
ENSDART00000011785 (rad54l-001) 3280974-3298674 protein_coding
ENSDARG00000096306 (LRRC41)
leucine rich repeat containing 41
ENSDART00000151416 (LRRC41-001) 3300289-3314225 protein_coding
CIL_000636_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000085999-ENSG00000132128 CGP 9606 1:46247688-46303608
GeneTranscriptPositionBiotype
ENSG00000132128 (LRRC41)
leucine rich repeat containing 41
ENST00000343304 (LRRC41-201) 46278401-46303366 protein_coding
ENST00000469150 (LRRC41-004) 46296742-46300780 processed_transcript
ENST00000472710 (LRRC41-002) 46278404-46299890 nonsense_mediated_decay
ENST00000496156 (LRRC41-005) 46261196-46281161 protein_coding
ENST00000498402 (LRRC41-003) 46284167-46303274 nonsense_mediated_decay
ENST00000615587 (LRRC41-006) 46278403-46303263 protein_coding
ENST00000617190 (LRRC41-001) 46277462-46303608 protein_coding
ENST00000617760 (LRRC41-202) 46278401-46286112 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000636_0001ENSDARG00000018623ENSDART00000011785ENSDARG00000096306ENSDART00000151416CIL_000636_0002ENSG00000132128ENST00000343304ENST00000469150ENST00000472710ENST00000496156ENST00000498402ENST00000615587ENST00000617190ENST00000617760
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000636_0001ENSDARG00000018623ENSDART00000011785ENSDARG00000096306ENSDART00000151416CIL_000636_0002ENSG00000132128ENST00000343304ENST00000469150ENST00000472710ENST00000496156ENST00000498402ENST00000615587ENST00000617190ENST00000617760
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000018623 ENSDART00000011785 N/A N/A N/A 0.333±0.15 N/A N/A 0.388±0.27 2.495±1.98 0.157±0.00 N/A 0.115±0.00 N/A N/A N/A
ENSDARG00000096306 ENSDART00000151416 N/A N/A N/A 1.022±0.13 N/A N/A 1.526±0.18 4.018±0.00 0.371±0.00 N/A 0.794±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132128 ENST00000343304 N/A N/A 2.321±0.00 N/A 2.547±0.75 N/A N/A N/A N/A N/A 5.225±0.00 N/A N/A N/A
ENST00000469150 N/A 1.319±0.00 0.406±0.00 0.303±0.00 N/A N/A N/A N/A N/A N/A N/A 0.890±0.00 N/A N/A
ENST00000472710 N/A N/A N/A N/A N/A N/A N/A 0.363±0.00 N/A N/A N/A N/A N/A N/A
ENST00000496156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.340±0.00 N/A N/A N/A
ENST00000498402 N/A N/A N/A N/A N/A 1.528±0.00 N/A N/A N/A 0.645±0.00 N/A N/A N/A N/A
ENST00000615587 24.183±0.00 11.839±0.00 N/A 6.261±4.75 14.117±0.00 5.974±4.21 6.596±5.54 16.073±0.00 4.475±2.03 12.392±11.87 20.809±0.00 23.771±19.27 26.879±6.45 25.018±0.00
ENST00000617190 N/A N/A N/A N/A 0.520±0.00 N/A 0.244±0.00 N/A N/A N/A 0.834±0.00 5.263±0.00 N/A N/A
ENST00000617760 N/A 7.905±0.00 N/A 3.749±1.49 4.739±0.00 8.001±0.00 3.016±2.09 6.335±3.17 6.934±0.00 4.951±3.41 8.851±5.69 16.402±10.18 21.182±10.48 31.530±18.91

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