C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Cas scaffolding protein family member 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000087589 CASS4 9606 + 20:56412112-56460387 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000360314 CASS4-001 56412112-56458780 protein_coding
  ENST00000434344 CASS4-002 56412261-56460387 protein_coding
  ENST00000497244 CASS4-003 56412308-56453896 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000360314ENST00000434344ENST00000497244
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000360314 N/A 0.142±0.00 N/A 0.147±0.00 0.048±0.00 0.084±0.00 N/A N/A 0.013±0.00 0.067±0.01 0.358±0.00 N/A
ENST00000434344 0.380±0.00 N/A 0.178±0.00 0.169±0.00 0.156±0.00 0.045±0.00 0.141±0.01 0.130±0.03 N/A 0.203±0.06 0.578±0.00 0.048±0.00
ENST00000497244 N/A N/A N/A N/A N/A N/A 0.135±0.00 N/A N/A N/A N/A 0.038±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099D CIL_00099D_0001 VISTA 20:56155251-56756351
CIL_0005JF CIL_0005JF_0001 CGP 20:56392371-56460387
CIL_00036G CIL_00036G_0001 CGP 20:56412112-56519449

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000155 IEA phosphorelay sensor kinase activity
GO:0000160 IEA phosphorelay signal transduction system
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0007155 IEA cell adhesion
GO:0016020 IEA membrane
GO:0023014 IEA signal transduction by phosphorylation
GO:0030054 IEA cell junction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006775 CASS4 Cas scaffolding protein family member 4 protein_coding Danio_rerio
ENSMUSG00000074570 Cass4 Cas scaffolding protein family member 4 protein_coding Mus_musculus

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