C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0005JF_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000101138-ENSG00000087589 | CGP | 9606 | 20:56392371-56460387  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000087589  (CASS4)Cas scaffolding protein family member 4 |
ENST00000360314 (CASS4-001)
|
56412112-56458780 | protein_coding | |
|
ENST00000434344 (CASS4-002)
|
56412261-56460387 | protein_coding | ||
|
ENST00000497244 (CASS4-003)
|
56412308-56453896 | retained_intron | ||
|
ENSG00000101138 (CSTF1) cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa |
ENST00000217109 (CSTF1-001)
|
56392394-56406369 | protein_coding | |
|
ENST00000415828 (CSTF1-002)
|
56392371-56399357 | protein_coding | ||
|
ENST00000428552 (CSTF1-006)
|
56392411-56397463 | protein_coding | ||
|
ENST00000452950 (CSTF1-003)
|
56392651-56399357 | protein_coding | ||
|
ENST00000490539 (CSTF1-005)
|
56392695-56399161 | nonsense_mediated_decay | ||
|
ENST00000493039 (CSTF1-007)
|
56392683-56404462 | nonsense_mediated_decay | ||
|
ENST00000498689 (CSTF1-004)
|
56392371-56395937 | retained_intron | ||
|
ENST00000613138 (CSTF1-008)
|
56392522-56397086 | processed_transcript | ||
|
ENSG00000228601 (RPL39P) ribosomal protein L39 pseudogene |
ENST00000450188 (RPL39P-001)
|
56459428-56459583 | processed_pseudogene | |
| CIL_0005JF_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000027498-ENSMUSG00000074570 | CGP | 10090 | 2:172370681-172433757 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000027498 (Cstf1) cleavage stimulation factor, 3' pre-RNA, subunit 1 |
ENSMUST00000116375 (Cstf1-001)
|
172370734-172382448 | protein_coding | |
|
ENSMUST00000151511 (Cstf1-002)
|
172370681-172376070 | protein_coding | ||
Expression Patterns
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