C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Cas scaffolding protein family member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000360314 CASS4-001 ENSG00000087589 9606 + 20:56412112-56458780 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartMuscleOvaryPlacentaENST00000360314
Transcript ID Bladder Breast Colon Heart Muscle Ovary Placenta
ENST00000360314 0.142±0.00 0.147±0.00 0.048±0.00 0.084±0.00 0.013±0.00 0.067±0.01 0.358±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099D CIL_00099D_0001 VISTA 20:56155251-56756351
CIL_0005JF CIL_0005JF_0001 CGP 20:56392371-56460387
CIL_00036G CIL_00036G_0001 CGP 20:56412112-56519449

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000155 IEA phosphorelay sensor kinase activity
GO:0000160 IEA phosphorelay signal transduction system
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0007155 IEA cell adhesion
GO:0016020 IEA membrane
GO:0023014 IEA signal transduction by phosphorylation
GO:0030054 IEA cell junction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103073 Cass4-002 protein_coding Mus_musculus 0 606
ENSMUST00000109136 Cass4-003 protein_coding Mus_musculus 0 401
ENSMUST00000099061 Cass4-001 protein_coding Mus_musculus 0 401

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