C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 23 (ascorbic acid transporter), member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000089057 SLC23A2 9606 - 20:4852356-5010293 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000338244 SLC23A2-002 4852356-5001499 protein_coding
  ENST00000379333 SLC23A2-001 4852356-5010293 protein_coding
  ENST00000423430 SLC23A2-004 4859367-4899647 protein_coding
  ENST00000468355 SLC23A2-003 4869588-5010270 processed_transcript
  ENST00000496331 SLC23A2-005 4873877-4885991 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000338244ENST00000379333
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000338244 2.218±0.00 3.303±0.00 N/A 7.782±2.82 1.993±0.00 1.151±0.00 1.664±0.00 3.551±1.74 2.929±0.68 1.995±0.62 N/A 4.403±3.34 2.470±1.09 3.232±2.00
ENST00000379333 N/A N/A 1.686±0.00 N/A N/A N/A 0.281±0.00 N/A N/A N/A 0.341±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004S5 CIL_0004S5_0001 CGP 20:4780023-5010293
CIL_0003LV CIL_0003LV_0001 CGP 20:4852356-5113103

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005737 IEA cytoplasm
GO:0005886 IDA plasma membrane
GO:0005887 IEA integral component of plasma membrane
GO:0006139 TAS nucleobase-containing compound metabolic process
GO:0006766 TAS vitamin metabolic process
GO:0006767 TAS water-soluble vitamin metabolic process
GO:0006810 IEA transport
GO:0006814 IEA sodium ion transport
GO:0006979 IEA response to oxidative stress
GO:0008520 IEA L-ascorbate:sodium symporter activity
GO:0008523 NAS sodium-dependent multivitamin transmembrane transporter activity
GO:0009925 IEA basal plasma membrane
GO:0015205 TAS nucleobase transmembrane transporter activity
GO:0015229 IDA L-ascorbic acid transporter activity
GO:0015851 TAS nucleobase transport
GO:0015882 IDA L-ascorbic acid transport
GO:0015993 NAS molecular hydrogen transport
GO:0016020 TAS:IEA membrane
GO:0016021 NAS integral component of membrane
GO:0016323 IDA basolateral plasma membrane
GO:0016324 IDA apical plasma membrane
GO:0019852 NAS L-ascorbic acid metabolic process
GO:0035461 NAS vitamin transmembrane transport
GO:0044281 TAS small molecule metabolic process
GO:0055085 IEA transmembrane transport
GO:0070890 IDA sodium-dependent L-ascorbate transmembrane transporter activity
GO:0070904 IDA transepithelial L-ascorbic acid transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000027340 Slc23a2 solute carrier family 23 (nucleobase transporters), member 2 protein_coding Mus_musculus

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