C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 23 (ascorbic acid transporter), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338244 SLC23A2-002 ENSG00000089057 9606 - 20:4852356-5001499 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000338244
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000338244 2.218±0.00 3.303±0.00 7.782±2.82 1.993±0.00 1.151±0.00 1.664±0.00 3.551±1.74 2.929±0.68 1.995±0.62 4.403±3.34 2.470±1.09 3.232±2.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004S5 CIL_0004S5_0001 CGP 20:4780023-5010293
CIL_0003LV CIL_0003LV_0001 CGP 20:4852356-5113103

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005886 IDA plasma membrane
GO:0006139 TAS nucleobase-containing compound metabolic process
GO:0006766 TAS vitamin metabolic process
GO:0006767 TAS water-soluble vitamin metabolic process
GO:0006810 IEA transport
GO:0006814 IEA sodium ion transport
GO:0008523 NAS sodium-dependent multivitamin transmembrane transporter activity
GO:0015205 TAS nucleobase transmembrane transporter activity
GO:0015229 IDA L-ascorbic acid transporter activity
GO:0015851 TAS nucleobase transport
GO:0015882 IDA L-ascorbic acid transport
GO:0015993 NAS molecular hydrogen transport
GO:0016020 TAS:IEA membrane
GO:0016021 NAS integral component of membrane
GO:0016323 IDA basolateral plasma membrane
GO:0016324 IDA apical plasma membrane
GO:0019852 NAS L-ascorbic acid metabolic process
GO:0035461 NAS vitamin transmembrane transport
GO:0044281 TAS small molecule metabolic process
GO:0055085 IEA transmembrane transport
GO:0070890 IDA sodium-dependent L-ascorbate transmembrane transporter activity
GO:0070904 IDA transepithelial L-ascorbic acid transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028815 Slc23a2-001 protein_coding Mus_musculus 0 2501
ENSMUST00000137910 Slc23a2-006 processed_transcript Mus_musculus 0 566
ENSMUST00000148749 Slc23a2-007 processed_transcript Mus_musculus 0.000000000008 79

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