C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: BRCA1 associated protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000089234 BRAP 9606 - 12:111642146-111685986 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000327551 BRAP-002 111644082-111685720 protein_coding
  ENST00000419234 BRAP-001 111642146-111685986 protein_coding
  ENST00000547043 BRAP-003 111644339-111673311 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000327551ENST00000419234ENST00000547043
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000327551 3.435±0.00 3.231±0.00 N/A 2.420±1.22 2.666±0.00 3.455±0.00 1.241±0.86 2.068±0.00 0.693±0.00 1.721±0.26 2.584±1.94 2.082±0.68 2.187±0.18 28.656±12.65
ENST00000419234 3.153±0.00 3.310±0.00 2.104±0.00 3.670±0.12 3.920±0.13 3.511±0.97 1.759±0.41 2.589±0.43 3.441±1.75 1.984±1.08 3.781±2.60 3.816±0.98 3.424±0.15 5.829±1.28
ENST00000547043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.337±0.00 3.522±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000151 IDA ubiquitin ligase complex
GO:0000165 IDA MAPK cascade
GO:0000166 IEA nucleotide binding
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0007265 IDA Ras protein signal transduction
GO:0008139 IDA nuclear localization sequence binding
GO:0008270 IEA zinc ion binding
GO:0009968 IDA negative regulation of signal transduction
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0031965 IDA nuclear membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008560 brap BRCA1 associated protein protein_coding Danio_rerio
ENSMUSG00000029458 Brap BRCA1 associated protein protein_coding Mus_musculus

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