C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BRCA1 associated protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000327551 BRAP-002 ENSG00000089234 9606 - 12:111644082-111685720 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000327551
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000327551 3.435±0.00 3.231±0.00 2.420±1.22 2.666±0.00 3.455±0.00 1.241±0.86 2.068±0.00 0.693±0.00 1.721±0.26 2.584±1.94 2.082±0.68 2.187±0.18 28.656±12.65

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111765 Brap-004 protein_coding Mus_musculus 0 1805
ENSMUST00000031414 Brap-001 protein_coding Mus_musculus 0 1803
ENSMUST00000140996 Brap-002 nonsense_mediated_decay Mus_musculus 0 1515
ENSMUST00000127703 Brap-005 protein_coding Mus_musculus 0 1297
ENSMUST00000142701 Brap-007 retained_intron Mus_musculus 0 470

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