C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NECAP endocytosis associated 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000089818 NECAP1 9606 + 12:8082211-8097771 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000339754 NECAP1-001 8082211-8097771 protein_coding
  ENST00000450991 NECAP1-003 8082268-8097769 nonsense_mediated_decay
  ENST00000537796 NECAP1-004 8091760-8097771 retained_intron
  ENST00000540083 NECAP1-010 8082787-8095700 protein_coding
  ENST00000541948 NECAP1-009 8082282-8095690 nonsense_mediated_decay
  ENST00000542095 NECAP1-006 8082255-8091984 retained_intron
  ENST00000544891 NECAP1-008 8082270-8090606 retained_intron
  ENST00000545807 NECAP1-007 8082268-8092771 retained_intron
  ENST00000546181 NECAP1-005 8082228-8090400 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000339754ENST00000450991ENST00000537796ENST00000545807
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000339754 5.431±0.00 6.062±0.00 35.234±0.88 2.900±0.61 2.907±1.54 3.198±1.19 10.075±0.00 4.328±1.12 5.186±1.10 3.290±0.00 8.823±2.17 7.248±1.20 8.339±1.75
ENST00000450991 N/A N/A N/A 1.106±0.10 1.201±0.00 N/A 2.924±0.00 N/A 0.915±0.00 N/A 4.683±0.00 1.180±0.00 1.541±0.00
ENST00000537796 N/A 1.668±0.00 N/A N/A N/A N/A N/A N/A 1.408±0.39 N/A 1.959±0.82 N/A N/A
ENST00000545807 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.445±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00001J CIL_00001J_0001 CGP 12:8058302-8097771
CIL_00001K CIL_00001K_0001 CGP 12:8082211-8138607

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0005905 IEA coated pit
GO:0006897 IEA endocytosis
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0030125 IEA clathrin vesicle coat

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020798 necap1 NECAP endocytosis associated 1 protein_coding Danio_rerio
ENSMUSG00000030327 Necap1 NECAP endocytosis associated 1 protein_coding Mus_musculus

Loading