C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00001J_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171860-ENSG00000089818 CGP 9606 12:8058302-8097771
GeneTranscriptPositionBiotype
ENSG00000089818 (NECAP1)
NECAP endocytosis associated 1 		ENST00000339754 (NECAP1-001) 8082211-8097771 protein_coding
ENST00000450991 (NECAP1-003) 8082268-8097769 nonsense_mediated_decay
ENST00000537796 (NECAP1-004) 8091760-8097771 retained_intron
ENST00000540083 (NECAP1-010) 8082787-8095700 protein_coding
ENST00000541948 (NECAP1-009) 8082282-8095690 nonsense_mediated_decay
ENST00000542095 (NECAP1-006) 8082255-8091984 retained_intron
ENST00000544891 (NECAP1-008) 8082270-8090606 retained_intron
ENST00000545807 (NECAP1-007) 8082268-8092771 retained_intron
ENST00000546181 (NECAP1-005) 8082228-8090400 retained_intron
ENSG00000171860 (C3AR1)
complement component 3a receptor 1 		ENST00000307637 (C3AR1-001) 8058302-8066471 protein_coding
ENST00000546241 (C3AR1-002) 8059746-8066337 protein_coding
ENSG00000279865 (RP11-69M1.6)
 ENST00000624929 (RP11-69M1.6-001) 8080381-8082163 TEC
CIL_00001J_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040552-ENSMUSG00000030327 CGP 10090 6:122847138-122888934
GeneTranscriptPositionBiotype
ENSMUSG00000030327 (Necap1)
NECAP endocytosis associated 1 		ENSMUST00000032477 (Necap1-201) 122874557-122888934 protein_coding
ENSMUSG00000040552 (C3ar1)
complement component 3a receptor 1 		ENSMUST00000042081 (C3ar1-001) 122847138-122856161 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001J_0001ENSG00000089818ENST00000339754ENST00000450991ENST00000537796ENST00000540083ENST00000541948ENST00000542095ENST00000544891ENST00000545807ENST00000546181ENSG00000171860ENST00000307637ENST00000546241ENSG00000279865ENST00000624929CIL_00001J_0002ENSMUSG00000030327ENSMUST00000032477ENSMUSG00000040552ENSMUST00000042081
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001J_0001ENSG00000089818ENST00000339754ENST00000450991ENST00000537796ENST00000545807ENSG00000171860ENST00000307637ENST00000546241ENSG00000279865ENST00000624929CIL_00001J_0002ENSMUSG00000030327ENSMUST00000032477ENSMUSG00000040552ENSMUST00000042081
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000089818 ENST00000339754 5.431±0.00 6.062±0.00 N/A 35.234±0.88 2.900±0.61 2.907±1.54 3.198±1.19 10.075±0.00 4.328±1.12 5.186±1.10 3.290±0.00 8.823±2.17 7.248±1.20 8.339±1.75
ENST00000450991 N/A N/A N/A N/A 1.106±0.10 1.201±0.00 N/A 2.924±0.00 N/A 0.915±0.00 N/A 4.683±0.00 1.180±0.00 1.541±0.00
ENST00000537796 N/A 1.668±0.00 N/A N/A N/A N/A N/A N/A N/A 1.408±0.39 N/A 1.959±0.82 N/A N/A
ENST00000540083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.445±0.00 N/A N/A N/A
ENST00000546181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171860 ENST00000307637 6.242±0.00 4.193±0.00 0.159±0.00 1.465±0.69 3.306±0.78 1.371±0.00 1.735±1.34 2.550±2.19 2.085±0.13 4.567±3.21 0.621±0.00 2.257±1.10 16.447±7.16 1.587±1.08
ENST00000546241 N/A N/A N/A N/A N/A N/A 0.406±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000279865 ENST00000624929 0.193±0.00 0.246±0.00 0.028±0.00 0.202±0.18 0.580±0.00 0.221±0.14 0.028±0.02 0.481±0.02 0.044±0.00 0.274±0.00 0.138±0.10 0.111±0.07 0.040±0.02 1.047±0.28
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030327 ENSMUST00000032477 11.539±1.36 13.648±0.98 13.091±2.71 23.997±6.48 9.129±2.22 9.246±1.43 7.808±0.27 11.880±1.16 14.416±1.51 10.919±0.50 4.788±0.39 9.246±2.83 23.111±11.15 4.642±2.39
ENSMUSG00000040552 ENSMUST00000042081 7.554±2.14 3.755±0.49 1.680±0.25 0.309±0.17 6.625±1.24 1.979±0.23 1.651±0.20 0.987±0.09 0.686±0.22 2.246±0.26 0.117±0.03 4.761±2.05 0.694±0.62 0.304±0.15

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