C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 38B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000095209 TMEM38B 9606 + 9:105694544-105776612 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000374688 TMEM38B-002 105700984-105776612 protein_coding
  ENST00000374692 TMEM38B-001 105694544-105776612 protein_coding
  ENST00000434214 TMEM38B-005 105694544-105705753 protein_coding
  ENST00000435034 TMEM38B-003 105705675-105774079 protein_coding
  ENST00000451560 TMEM38B-004 105721687-105749282 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000374688ENST00000374692ENST00000435034ENST00000451560
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000374688 N/A 0.889±0.00 N/A 0.288±0.00 N/A N/A N/A N/A 0.343±0.00 N/A N/A N/A 2.194±0.00
ENST00000374692 0.359±0.00 1.006±0.00 1.284±0.00 0.570±0.07 0.932±0.31 2.674±0.00 1.326±0.08 0.879±0.54 0.846±0.00 1.332±0.00 2.107±0.95 0.846±0.24 6.761±0.00
ENST00000435034 N/A 2.539±0.00 5.075±0.00 3.258±0.00 2.667±0.00 9.224±2.22 3.231±0.00 2.095±0.41 2.541±1.19 12.151±4.85 4.833±0.75 0.501±0.00 13.322±0.00
ENST00000451560 N/A N/A N/A N/A N/A N/A N/A N/A 2.897±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064K CIL_00064K_0001 CGP 9:105662457-105776612
CIL_0001JX CIL_0001JX_0001 CGP 9:105694544-107013634

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005261 IEA cation channel activity
GO:0005267 TAS potassium channel activity
GO:0005634 IDA nucleus
GO:0015672 IEA monovalent inorganic cation transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0031965 NAS nuclear membrane
GO:0033017 NAS sarcoplasmic reticulum membrane
GO:0071805 IEA potassium ion transmembrane transport
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041562 CABZ01079427.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000028420 Tmem38b transmembrane protein 38B protein_coding Mus_musculus

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