C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001JX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000095209-ENSG00000148143 CGP 9606 9:105694544-107013634
GeneTranscriptPositionBiotype
ENSG00000095209 (TMEM38B)
transmembrane protein 38B 		ENST00000374688 (TMEM38B-002) 105700984-105776612 protein_coding
ENST00000374692 (TMEM38B-001) 105694544-105776612 protein_coding
ENST00000434214 (TMEM38B-005) 105694544-105705753 protein_coding
ENST00000435034 (TMEM38B-003) 105705675-105774079 protein_coding
ENST00000451560 (TMEM38B-004) 105721687-105749282 protein_coding
ENSG00000148143 (ZNF462)
zinc finger protein 462 		ENST00000277225 (ZNF462-001) 106863097-107013634 protein_coding
ENST00000374686 (ZNF462-002) 106927264-107011508 protein_coding
ENST00000427098 (ZNF462-003) 106938977-106974970 protein_coding
ENST00000441147 (ZNF462-009) 106927378-107011482 protein_coding
ENST00000469433 (ZNF462-004) 106932608-106974220 processed_transcript
ENST00000471032 (ZNF462-012) 106932621-106939094 processed_transcript
ENST00000472574 (ZNF462-010) 106863166-106930575 protein_coding
ENST00000479166 (ZNF462-008) 106932637-106972225 processed_transcript
ENST00000480607 (ZNF462-011) 106926925-106932462 processed_transcript
ENST00000482115 (ZNF462-007) 106972142-106995682 processed_transcript
ENST00000483287 (ZNF462-006) 107009189-107011018 processed_transcript
ENST00000497489 (ZNF462-005) 106929680-106935621 processed_transcript
ENSG00000200131 (RN7SKP77)
RNA, 7SK small nuclear pseudogene 77 		ENST00000363261 (RN7SKP77-201) 106679977-106680329 misc_RNA
ENSG00000225002 (RP11-6F6.1)
 ENST00000445897 (RP11-6F6.1-001) 106061354-106064825 lincRNA
ENSG00000228366 (RP11-18B3.3)
 ENST00000443781 (RP11-18B3.3-001) 105710290-105710781 processed_pseudogene
ENSG00000228948 (SLC25A6P5)
solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 pseudogene 5 		ENST00000435663 (SLC25A6P5-001) 105849710-105850603 processed_pseudogene
ENST00000602729 (SLC25A6P5-002) 105850025-105851425 processed_pseudogene
ENSG00000229297 (RP11-540H22.2)
 ENST00000430534 (RP11-540H22.2-001) 106584142-106591952 lincRNA
ENSG00000231562 (RP11-508N12.3)
 ENST00000444758 (RP11-508N12.3-001) 106978776-106979554 processed_pseudogene
ENSG00000232486 (RP11-18B3.2)
 ENST00000421655 (RP11-18B3.2-001) 105758164-105760755 processed_pseudogene
ENSG00000234229 (LINC01505)
long intergenic non-protein coding RNA 1505 		ENST00000411451 (LINC01505-001) 106664754-106702662 lincRNA
ENST00000444985 (LINC01505-002) 106616058-106679798 lincRNA
ENSG00000234323 (RP11-308N19.1)
 ENST00000425709 (RP11-308N19.1-001) 106450816-106604795 lincRNA
ENST00000435485 (RP11-308N19.1-002) 106278392-106604795 lincRNA
ENSG00000237062 (RP11-308N19.3)
 ENST00000446206 (RP11-308N19.3-001) 106615078-106615806 lincRNA
CIL_0001JX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028420-ENSMUSG00000060206 CGP 10090 4:53826045-55083563
GeneTranscriptPositionBiotype
ENSMUSG00000028420 (Tmem38b)
transmembrane protein 38B 		ENSMUST00000030127 (Tmem38b-001) 53826045-53862019 protein_coding
ENSMUST00000144167 (Tmem38b-003) 53840470-53854332 protein_coding
ENSMUST00000150803 (Tmem38b-002) 53826055-53832688 processed_transcript
ENSMUST00000151206 (Tmem38b-004) 53826057-53847844 processed_transcript
ENSMUSG00000060206 (Zfp462)
zinc finger protein 462 		ENSMUST00000030131 (Zfp462-003) 55011366-55081358 protein_coding
ENSMUST00000079605 (Zfp462-004) 55011480-55081330 protein_coding
ENSMUST00000098070 (Zfp462-001) 54947976-55083563 protein_coding
ENSMUST00000133895 (Zfp462-002) 54945048-55008314 protein_coding
ENSMUSG00000081428 (Tpt1-ps2)
tumor protein, translationally-controlled, pseudogene 2 		ENSMUST00000120548 (Tpt1-ps2-001) 54564623-54565143 processed_pseudogene
ENSMUSG00000082111 (Gm12479)
predicted gene 12479 		ENSMUST00000120731 (Gm12479-001) 54853128-54854712 processed_pseudogene
ENSMUSG00000083624 (Gm12469)
predicted gene 12469 		ENSMUST00000117623 (Gm12469-001) 54235670-54235876 processed_pseudogene
ENSMUSG00000083868 (Gm12477)
predicted gene 12477 		ENSMUST00000121221 (Gm12477-001) 54669622-54670192 processed_pseudogene
ENSMUSG00000083985 (Gm12468)
predicted gene 12468 		ENSMUST00000116189 (Gm12468-001) 53877925-53878328 processed_pseudogene
ENSMUSG00000086371 (Gm12478)
predicted gene 12478 		ENSMUST00000127709 (Gm12478-001) 54646542-54689451 lincRNA
ENSMUSG00000086987 (Gm12484)
predicted gene 12484 		ENSMUST00000156311 (Gm12484-001) 54151831-54163678 lincRNA
ENSMUSG00000087077 (Gm12480)
predicted gene 12480 		ENSMUST00000129576 (Gm12480-001) 54651903-54656077 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001JX_0001ENSG00000095209ENST00000374688ENST00000374692ENST00000434214ENST00000435034ENST00000451560ENSG00000148143ENST00000277225ENST00000374686ENST00000427098ENST00000441147ENST00000469433ENST00000471032ENST00000472574ENST00000479166ENST00000480607ENST00000482115ENST00000483287ENST00000497489ENSG00000200131ENST00000363261ENSG00000225002ENST00000445897ENSG00000228366ENST00000443781ENSG00000228948ENST00000435663ENST00000602729ENSG00000229297ENST00000430534ENSG00000231562ENST00000444758ENSG00000232486ENST00000421655ENSG00000234229ENST00000411451ENST00000444985ENSG00000234323ENST00000425709ENST00000435485ENSG00000237062ENST00000446206CIL_0001JX_0002ENSMUSG00000028420ENSMUST00000030127ENSMUST00000144167ENSMUST00000150803ENSMUST00000151206ENSMUSG00000060206ENSMUST00000030131ENSMUST00000079605ENSMUST00000098070ENSMUST00000133895ENSMUSG00000081428ENSMUST00000120548ENSMUSG00000082111ENSMUST00000120731ENSMUSG00000083624ENSMUST00000117623ENSMUSG00000083868ENSMUST00000121221ENSMUSG00000083985ENSMUST00000116189ENSMUSG00000086371ENSMUST00000127709ENSMUSG00000086987ENSMUST00000156311ENSMUSG00000087077ENSMUST00000129576
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000095209 ENST00000374688 N/A N/A 0.889±0.00 N/A 0.288±0.00 N/A N/A N/A N/A 0.343±0.00 N/A N/A N/A 2.194±0.00
ENST00000374692 N/A 0.359±0.00 1.006±0.00 1.284±0.00 0.570±0.07 0.932±0.31 2.674±0.00 1.326±0.08 0.879±0.54 0.846±0.00 1.332±0.00 2.107±0.95 0.846±0.24 6.761±0.00
ENST00000434214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435034 N/A N/A 2.539±0.00 5.075±0.00 3.258±0.00 2.667±0.00 9.224±2.22 3.231±0.00 2.095±0.41 2.541±1.19 12.151±4.85 4.833±0.75 0.501±0.00 13.322±0.00
ENST00000451560 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.897±0.00 N/A N/A N/A N/A
ENSG00000148143 ENST00000277225 N/A N/A N/A 0.377±0.00 N/A 0.765±0.38 1.180±0.00 0.522±0.00 1.083±1.01 0.741±0.61 0.519±0.00 1.934±1.51 0.446±0.25 0.983±0.21
ENST00000374686 0.512±0.00 1.320±0.00 N/A 1.048±0.00 N/A N/A N/A N/A 0.120±0.00 0.821±0.01 1.961±0.72 3.340±0.54 0.580±0.20 N/A
ENST00000427098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441147 1.341±0.00 N/A 0.691±0.00 2.286±0.00 1.921±0.99 1.383±0.22 1.104±0.00 0.750±0.56 N/A N/A 1.431±0.00 1.299±0.53 0.182±0.04 3.528±0.18
ENST00000469433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480607 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482115 N/A N/A N/A N/A N/A N/A N/A 1.341±0.00 N/A N/A N/A N/A N/A N/A
ENST00000483287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200131 ENST00000363261 N/A N/A N/A N/A N/A N/A 0.741±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000225002 ENST00000445897 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.930±0.00 N/A N/A N/A 0.041±0.00
ENSG00000228366 ENST00000443781 N/A N/A N/A 0.098±0.00 0.024±0.00 N/A 0.449±0.43 N/A N/A N/A 2.560±0.00 0.098±0.01 N/A N/A
ENSG00000228948 ENST00000435663 N/A N/A N/A N/A N/A 0.059±0.00 N/A N/A N/A N/A N/A 0.096±0.00 0.061±0.00 N/A
ENST00000602729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.054±0.00 0.027±0.00 0.109±0.00
ENSG00000229297 ENST00000430534 N/A N/A N/A N/A N/A N/A 0.079±0.05 N/A N/A N/A N/A N/A N/A N/A
ENSG00000231562 ENST00000444758 N/A 0.020±0.00 N/A N/A 0.094±0.07 0.252±0.00 0.018±0.00 N/A N/A 0.153±0.00 N/A 0.110±0.07 N/A 0.036±0.00
ENSG00000232486 ENST00000421655 0.004±0.00 N/A 0.334±0.00 0.261±0.00 0.186±0.18 N/A 0.116±0.10 0.026±0.00 0.075±0.00 0.244±0.00 0.118±0.10 0.132±0.18 0.008±0.00 0.018±0.00
ENSG00000234229 ENST00000411451 N/A 0.028±0.00 N/A 0.122±0.00 0.114±0.00 0.158±0.00 0.218±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000444985 N/A N/A N/A N/A N/A 0.010±0.00 0.037±0.00 N/A N/A N/A 0.326±0.00 N/A N/A 0.574±0.30
ENSG00000234323 ENST00000425709 N/A N/A N/A 0.097±0.00 N/A N/A 0.608±0.09 N/A N/A N/A N/A 0.036±0.00 0.015±0.00 0.014±0.00
ENST00000435485 0.036±0.00 0.047±0.00 N/A 0.088±0.00 0.039±0.00 0.152±0.00 0.212±0.07 0.040±0.00 0.030±0.02 0.045±0.00 N/A N/A 0.021±0.00 0.080±0.00
ENSG00000237062 ENST00000446206 N/A N/A N/A N/A N/A N/A 0.080±0.04 N/A N/A N/A N/A N/A N/A 0.305±0.16
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028420 ENSMUST00000030127 5.820±1.27 2.348±0.30 9.893±2.58 1.455±0.46 2.632±0.37 3.170±0.82 3.567±0.67 5.805±1.19 6.663±3.82 5.215±0.75 17.941±1.38 2.065±0.69 7.451±3.91 5.123±1.35
ENSMUST00000144167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.014±0.00 7.836±2.31 16.038±0.00
ENSMUST00000150803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151206 2.833±0.03 22.722±4.79 N/A N/A 2.674±0.30 5.443±2.38 3.539±0.00 9.219±1.30 36.251±2.67 6.689±2.66 N/A 3.645±0.69 N/A 6.395±2.87
ENSMUSG00000060206 ENSMUST00000030131 0.898±0.00 1.913±0.00 N/A N/A 0.899±0.47 0.640±0.07 0.557±0.09 N/A 0.057±0.01 N/A 0.993±0.22 1.132±0.00 N/A N/A
ENSMUST00000079605 1.296±0.49 1.941±0.45 1.171±0.17 7.583±2.64 1.164±0.32 0.838±0.27 N/A 1.577±0.41 0.065±0.03 N/A 0.800±0.38 1.846±1.10 1.010±0.30 2.603±3.82
ENSMUST00000098070 0.853±0.50 2.350±0.23 2.254±0.00 6.726±2.73 0.740±0.52 1.315±0.36 0.164±0.00 1.089±0.48 0.123±0.09 1.438±0.39 0.971±0.42 3.207±1.03 0.817±0.46 0.435±0.03
ENSMUST00000133895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081428 ENSMUST00000120548 N/A N/A N/A N/A N/A N/A 0.092±0.00 N/A N/A 0.149±0.00 N/A N/A N/A 0.112±0.00
ENSMUSG00000082111 ENSMUST00000120731 N/A N/A N/A N/A N/A 0.077±0.00 N/A 0.254±0.15 N/A 0.034±0.00 0.028±0.00 0.190±0.00 0.017±0.00 0.049±0.04
ENSMUSG00000083624 ENSMUST00000117623 N/A N/A N/A N/A N/A N/A N/A N/A 0.576±0.40 N/A N/A 1.699±0.33 1.267±0.00 N/A
ENSMUSG00000083868 ENSMUST00000121221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.180±0.00
ENSMUSG00000083985 ENSMUST00000116189 N/A N/A N/A 0.125±0.01 0.439±0.30 N/A N/A 0.123±0.00 0.044±0.03 N/A N/A 1.283±0.00 0.861±0.44 N/A
ENSMUSG00000086371 ENSMUST00000127709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.596±0.20
ENSMUSG00000086987 ENSMUST00000156311 0.066±0.00 0.132±0.00 N/A 0.017±0.00 N/A N/A N/A N/A N/A N/A N/A 0.128±0.00 0.100±0.06 0.048±0.00
ENSMUSG00000087077 ENSMUST00000129576 0.119±0.02 1.091±0.40 0.158±0.03 0.615±0.30 0.420±0.21 0.307±0.10 0.117±0.00 0.196±0.12 0.143±0.12 0.521±0.07 0.048±0.00 0.467±0.37 0.209±0.13 3.771±1.68

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