C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100075 SLC25A1 9606 - 22:19175575-19178830 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000215882 SLC25A1-001 19175575-19178830 protein_coding
  ENST00000451283 SLC25A1-003 19175593-19178521 protein_coding
  ENST00000461267 SLC25A1-005 19176667-19178480 processed_transcript
  ENST00000468824 SLC25A1-004 19177990-19178635 processed_transcript
  ENST00000470922 SLC25A1-002 19175610-19178739 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000215882ENST00000451283ENST00000461267ENST00000470922
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000215882 25.580±0.00 7.520±0.00 1.145±0.00 8.631±0.00 27.154±23.42 4.240±1.86 2.404±1.72 16.916±4.41 22.285±20.30 9.478±6.80 2.168±0.00 21.785±15.22 26.554±2.63 5.019±0.58
ENST00000451283 42.655±0.00 27.399±0.00 3.238±0.00 1.043±0.00 86.834±0.00 27.977±0.00 N/A 7.474±0.00 N/A 6.736±0.00 1.338±0.00 31.452±8.16 38.283±6.62 28.921±8.79
ENST00000461267 N/A N/A N/A N/A N/A N/A N/A 3.510±0.00 N/A N/A N/A N/A N/A N/A
ENST00000470922 N/A 4.658±0.00 N/A 0.459±0.00 1.231±0.00 8.837±0.00 6.521±0.00 29.991±0.00 32.973±0.00 20.237±0.00 6.552±0.00 N/A N/A 12.127±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000244 CIL_000244_0001 CGP 22:19148576-19178830

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005739 IEA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0005975 TAS carbohydrate metabolic process
GO:0006006 TAS glucose metabolic process
GO:0006094 TAS gluconeogenesis
GO:0006810 IEA transport
GO:0015137 TAS citrate transmembrane transporter activity
GO:0015746 TAS citrate transport
GO:0016021 IEA integral component of membrane
GO:0019432 TAS triglyceride biosynthetic process
GO:0035338 TAS long-chain fatty-acyl-CoA biosynthetic process
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0055085 IEA transmembrane transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057110 slc25a1a solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1a protein_coding Danio_rerio
ENSMUSG00000003528 Slc25a1 solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1 protein_coding Mus_musculus

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