C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000215882 SLC25A1-001 ENSG00000100075 9606 - 22:19175575-19178830 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000215882
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000215882 25.580±0.00 7.520±0.00 1.145±0.00 8.631±0.00 27.154±23.42 4.240±1.86 2.404±1.72 16.916±4.41 22.285±20.30 9.478±6.80 2.168±0.00 21.785±15.22 26.554±2.63 5.019±0.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000244 CIL_000244_0001 CGP 22:19148576-19178830

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005739 IEA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0005975 TAS carbohydrate metabolic process
GO:0006006 TAS glucose metabolic process
GO:0006094 TAS gluconeogenesis
GO:0006810 IEA transport
GO:0015137 TAS citrate transmembrane transporter activity
GO:0015746 TAS citrate transport
GO:0016021 IEA integral component of membrane
GO:0019432 TAS triglyceride biosynthetic process
GO:0035338 TAS long-chain fatty-acyl-CoA biosynthetic process
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0055085 IEA transmembrane transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003622 Slc25a1-001 protein_coding Mus_musculus 0 1197
ENSMUST00000129270 Slc25a1-006 retained_intron Mus_musculus 0 793
ENSMUST00000150925 Slc25a1-003 retained_intron Mus_musculus 0 656
ENSMUST00000131507 Slc25a1-004 protein_coding Mus_musculus 0 625
ENSMUST00000142022 Slc25a1-005 retained_intron Mus_musculus 0 564

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