C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: adaptor-related protein complex 1, beta 1 subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100280 AP1B1 9606 - 22:29327680-29423179 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000317368 AP1B1-002 29327865-29388583 protein_coding
  ENST00000357586 AP1B1-201 29327682-29388583 protein_coding
  ENST00000402502 AP1B1-004 29328738-29367275 protein_coding
  ENST00000405198 AP1B1-001 29327865-29367275 protein_coding
  ENST00000415447 AP1B1-202 29328821-29423179 protein_coding
  ENST00000415756 AP1B1-008 29349273-29351747 protein_coding
  ENST00000421126 AP1B1-003 29341563-29370659 protein_coding
  ENST00000432560 AP1B1-203 29327682-29388583 protein_coding
  ENST00000472057 AP1B1-007 29331457-29340837 processed_transcript
  ENST00000473606 AP1B1-006 29359673-29388529 retained_intron
  ENST00000482818 AP1B1-005 29327680-29332321 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000317368ENST00000357586ENST00000405198ENST00000415447ENST00000421126ENST00000432560
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000317368 14.165±0.00 16.134±0.00 1.390±0.00 7.939±0.00 7.152±6.09 4.962±0.00 0.961±0.56 14.339±0.00 2.770±0.00 3.409±0.00 2.192±0.00 11.012±7.70 15.928±10.89 10.410±3.95
ENST00000357586 N/A N/A N/A 4.477±0.34 N/A N/A 1.480±0.77 N/A N/A N/A N/A N/A 6.829±0.00 14.021±0.00
ENST00000405198 9.677±0.00 14.818±0.00 N/A 13.142±0.00 8.172±0.00 5.381±0.00 2.744±0.00 5.357±0.00 5.688±0.00 7.995±0.00 7.309±0.00 8.612±1.65 N/A 10.866±3.35
ENST00000415447 N/A N/A N/A N/A 2.013±0.00 2.283±0.00 0.572±0.00 2.314±0.00 2.480±0.00 2.626±0.00 2.184±0.00 3.107±0.00 N/A N/A
ENST00000421126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.953±0.00 N/A N/A N/A
ENST00000432560 3.642±0.00 N/A N/A N/A N/A N/A 3.011±0.00 4.543±0.00 4.836±4.05 N/A 1.549±0.00 7.532±5.10 21.648±3.06 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TY CIL_0004TY_0002 CGP 22:29312933-29423179

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005215 TAS transporter activity
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005765 TAS lysosomal membrane
GO:0005829 TAS cytosol
GO:0006886 IEA intracellular protein transport
GO:0006892 TAS post-Golgi vesicle-mediated transport
GO:0008565 IEA protein transporter activity
GO:0015031 IEA protein transport
GO:0016032 TAS viral process
GO:0016192 IEA vesicle-mediated transport
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0019901 ISS protein kinase binding
GO:0030117 IEA membrane coat
GO:0030131 IEA clathrin adaptor complex
GO:0030659 TAS cytoplasmic vesicle membrane
GO:0032588 TAS trans-Golgi network membrane
GO:0050690 TAS regulation of defense response to virus by virus
GO:0061024 TAS membrane organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020621 ap1b1 adaptor-related protein complex 1, beta 1 subunit protein_coding Danio_rerio
ENSMUSG00000009090 Ap1b1 adaptor protein complex AP-1, beta 1 subunit protein_coding Mus_musculus

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