C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 1, beta 1 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000405198 AP1B1-001 ENSG00000100280 9606 - 22:29327865-29367275 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000405198
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000405198 9.677±0.00 14.818±0.00 13.142±0.00 8.172±0.00 5.381±0.00 2.744±0.00 5.357±0.00 5.688±0.00 7.995±0.00 7.309±0.00 8.612±1.65 10.866±3.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TY CIL_0004TY_0002 CGP 22:29312933-29423179

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005215 TAS transporter activity
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005765 TAS lysosomal membrane
GO:0005829 TAS cytosol
GO:0006886 IEA intracellular protein transport
GO:0006892 TAS post-Golgi vesicle-mediated transport
GO:0008565 IEA protein transporter activity
GO:0015031 IEA protein transport
GO:0016032 TAS viral process
GO:0016192 IEA vesicle-mediated transport
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0019901 ISS protein kinase binding
GO:0030117 IEA membrane coat
GO:0030131 IEA clathrin adaptor complex
GO:0030659 TAS cytoplasmic vesicle membrane
GO:0032588 TAS trans-Golgi network membrane
GO:0050690 TAS regulation of defense response to virus by virus
GO:0061024 TAS membrane organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000009234 Ap1b1-201 protein_coding Mus_musculus 0 3618
ENSMUST00000101613 Ap1b1-002 protein_coding Mus_musculus 0 2804
ENSMUST00000109897 Ap1b1-001 protein_coding Mus_musculus 0 2756
ENSDART00000137128 ap1b1-001 protein_coding Danio_rerio 0 1709
ENSDART00000022518 ap1b1-201 protein_coding Danio_rerio 0 1703
ENSDART00000050916 ap2b1-201 protein_coding Danio_rerio 0 1596
ENSDART00000134387 ap2b1-001 protein_coding Danio_rerio 0 1596
ENSMUST00000142325 Ap1b1-005 processed_transcript Mus_musculus 0 758
ENSMUST00000145704 Ap1b1-004 processed_transcript Mus_musculus 0 649
ENSMUST00000133007 Ap1b1-006 processed_transcript Mus_musculus 0 601
ENSMUST00000133014 Ap1b1-007 processed_transcript Mus_musculus 0 527
ENSMUST00000144426 Ap1b1-003 processed_transcript Mus_musculus 0 457
ENSMUST00000137292 Ap1b1-008 processed_transcript Mus_musculus 0 366

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