C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: adaptor protein complex AP-1, beta 1 subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000009090 Ap1b1 10090 + 11:4986824-5042791 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000009234 Ap1b1-201 4986824-5042791 protein_coding
  ENSMUST00000101613 Ap1b1-002 5009530-5042729 protein_coding
  ENSMUST00000109897 Ap1b1-001 4986824-5042729 protein_coding
  ENSMUST00000133007 Ap1b1-006 5038764-5040421 processed_transcript
  ENSMUST00000133014 Ap1b1-007 4986934-5016851 processed_transcript
  ENSMUST00000137292 Ap1b1-008 4986912-5015741 processed_transcript
  ENSMUST00000142325 Ap1b1-005 5037369-5040402 processed_transcript
  ENSMUST00000144426 Ap1b1-003 5009474-5015741 processed_transcript
  ENSMUST00000145704 Ap1b1-004 5030977-5032790 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009234ENSMUST00000101613ENSMUST00000109897ENSMUST00000144426
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009234 22.964±7.98 30.937±2.72 24.744±1.48 29.561±3.35 26.189±9.78 36.662±14.61 13.559±1.36 33.663±10.26 22.389±10.80 29.111±1.88 5.973±0.71 20.032±8.31 27.335±10.15 7.182±3.17
ENSMUST00000101613 N/A N/A N/A 16.906±0.94 N/A N/A 3.811±1.18 N/A N/A N/A N/A 4.806±0.07 N/A N/A
ENSMUST00000109897 N/A N/A N/A 20.251±0.00 N/A N/A N/A N/A N/A N/A N/A 6.084±0.00 16.651±2.47 3.501±0.00
ENSMUST00000144426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 58.974±0.00 95.192±10.43 62.509±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VQ CIL_0003VQ_0002 CGP 11:4986824-5065327

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005802 TAS trans-Golgi network
GO:0006886 TAS intracellular protein transport
GO:0008565 IEA protein transporter activity
GO:0016192 TAS vesicle-mediated transport
GO:0019901 IPI protein kinase binding
GO:0030131 IEA clathrin adaptor complex
GO:0031410 IEA cytoplasmic vesicle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020621 ap1b1 adaptor-related protein complex 1, beta 1 subunit protein_coding Danio_rerio
ENSG00000100280 AP1B1 adaptor-related protein complex 1, beta 1 subunit protein_coding Homo_sapiens

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