C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromobox homolog 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100307 CBX7 9606 - 22:39120167-39152674 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000216133 CBX7-001 39130772-39152650 protein_coding
  ENST00000401405 CBX7-003 39133584-39152444 protein_coding
  ENST00000434260 CBX7-005 39134569-39152552 protein_coding
  ENST00000475962 CBX7-007 39120167-39149832 processed_transcript
  ENST00000477827 CBX7-004 39141120-39152540 retained_intron
  ENST00000482294 CBX7-002 39147118-39152674 retained_intron
  ENST00000490741 CBX7-006 39133691-39134779 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyOvaryPlacentaENST00000216133ENST00000401405
Transcript ID Brain Breast Kidney Ovary Placenta
ENST00000216133 25.627±0.00 1.683±0.70 1.187±0.00 3.261±2.04 0.676±0.00
ENST00000401405 N/A 2.388±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005NO CIL_0005NO_0001 CGP 22:39120167-39244751

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0000790 IDA nuclear chromatin
GO:0000792 IEA heterochromatin
GO:0003682 IEA chromatin binding
GO:0003727 IEA single-stranded RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0016568 IEA chromatin modification
GO:0031519 IDA PcG protein complex
GO:0035064 IEA methylated histone binding
GO:0035102 ISS PRC1 complex
GO:0048733 IEA sebaceous gland development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038025 cbx7a chromobox homolog 7a protein_coding Danio_rerio
ENSDARG00000087181 cbx7b chromobox homolog 7b protein_coding Danio_rerio
ENSMUSG00000053411 Cbx7 chromobox 7 protein_coding Mus_musculus

Loading