C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: l(3)mbt-like 2 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100395 L3MBTL2 9606 + 22:41205205-41231271 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000216237 L3MBTL2-001 41205205-41231271 protein_coding
  ENST00000449635 L3MBTL2-008 41209696-41221367 protein_coding
  ENST00000450939 L3MBTL2-009 41209696-41224165 nonsense_mediated_decay
  ENST00000452106 L3MBTL2-005 41205324-41231271 nonsense_mediated_decay
  ENST00000453659 L3MBTL2-007 41205312-41210008 nonsense_mediated_decay
  ENST00000466589 L3MBTL2-004 41205309-41230654 retained_intron
  ENST00000479978 L3MBTL2-002 41205321-41231270 retained_intron
  ENST00000481902 L3MBTL2-003 41205282-41227810 retained_intron
  ENST00000489136 L3MBTL2-006 41205302-41217173 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000216237ENST00000449635ENST00000452106ENST00000466589ENST00000479978ENST00000481902
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000216237 2.471±0.00 7.348±0.00 0.249±0.00 4.857±1.04 4.178±2.66 5.101±0.00 1.274±0.47 2.630±0.00 2.104±1.10 3.986±0.00 1.192±0.00 8.760±5.37 9.534±3.00 5.853±0.39
ENST00000449635 N/A N/A N/A N/A N/A 1.850±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452106 N/A 2.926±0.00 N/A N/A N/A N/A 1.742±0.00 4.210±0.00 1.939±0.00 N/A 1.761±0.00 N/A N/A 3.475±0.00
ENST00000466589 N/A N/A 0.502±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479978 0.427±0.00 N/A N/A N/A 0.733±0.00 N/A 0.173±0.00 N/A N/A N/A N/A 0.737±0.00 N/A N/A
ENST00000481902 N/A N/A N/A N/A N/A 1.541±0.00 N/A N/A 1.193±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006RK CIL_0006RK_0001 CGP 22:41091786-41231271
CIL_0000VA CIL_0000VA_0002 CGP 22:41205205-41240934

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA:IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0016568 IEA chromatin modification
GO:0035064 IDA methylated histone binding
GO:0042393 IPI histone binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056079 l3mbtl2 l(3)mbt-like 2 (Drosophila) protein_coding Danio_rerio
ENSMUSG00000022394 L3mbtl2 l(3)mbt-like 2 (Drosophila) protein_coding Mus_musculus

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