C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: l(3)mbt-like 2 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022394 L3mbtl2 10090 + 15:81663889-81688315 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023029 L3mbtl2-001 81663889-81688315 protein_coding
  ENSMUST00000172568 L3mbtl2-003 81663956-81688299 processed_transcript
  ENSMUST00000172620 L3mbtl2-004 81663954-81688305 retained_intron
  ENSMUST00000172748 L3mbtl2-005 81663956-81688315 protein_coding
  ENSMUST00000173105 L3mbtl2-010 81668678-81670369 retained_intron
  ENSMUST00000173607 L3mbtl2-009 81668747-81675633 processed_transcript
  ENSMUST00000173761 L3mbtl2-006 81686022-81687187 retained_intron
  ENSMUST00000174229 L3mbtl2-002 81663934-81688305 protein_coding
  ENSMUST00000174274 L3mbtl2-011 81664001-81682065 processed_transcript
  ENSMUST00000174401 L3mbtl2-007 81682009-81683850 retained_intron
  ENSMUST00000174497 L3mbtl2-008 81675522-81677294 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023029ENSMUST00000172620ENSMUST00000172748ENSMUST00000174229
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023029 4.950±0.63 4.098±0.70 8.446±0.70 6.924±1.02 4.800±0.71 3.459±0.41 2.419±0.20 3.904±0.23 5.363±2.83 4.013±0.46 3.138±0.40 4.837±1.49 9.910±4.66 8.697±2.86
ENSMUST00000172620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.465±0.00 N/A 0.278±0.00
ENSMUST00000172748 N/A N/A N/A 4.956±0.00 2.774±0.00 N/A N/A N/A N/A N/A 0.647±0.00 3.010±0.00 3.023±1.32 1.844±0.00
ENSMUST00000174229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.923±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006RK CIL_0006RK_0002 CGP 15:81585351-81688315
CIL_0000VA CIL_0000VA_0003 CGP 15:81663889-81697287

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0016568 IEA chromatin modification
GO:0035064 ISS methylated histone binding
GO:0042393 IEA histone binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056079 l3mbtl2 l(3)mbt-like 2 (Drosophila) protein_coding Danio_rerio
ENSG00000100395 L3MBTL2 l(3)mbt-like 2 (Drosophila) protein_coding Homo_sapiens

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