C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: l(3)mbt-like 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000216237 L3MBTL2-001 ENSG00000100395 9606 + 22:41205205-41231271 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000216237
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000216237 2.471±0.00 7.348±0.00 0.249±0.00 4.857±1.04 4.178±2.66 5.101±0.00 1.274±0.47 2.630±0.00 2.104±1.10 3.986±0.00 1.192±0.00 8.760±5.37 9.534±3.00 5.853±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006RK CIL_0006RK_0001 CGP 22:41091786-41231271
CIL_0000VA CIL_0000VA_0002 CGP 22:41205205-41240934

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA:IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0016568 IEA chromatin modification
GO:0035064 IDA methylated histone binding
GO:0042393 IPI histone binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023029 L3mbtl2-001 protein_coding Mus_musculus 0 2490
ENSMUST00000174229 L3mbtl2-002 protein_coding Mus_musculus 0 2440
ENSMUST00000172748 L3mbtl2-005 protein_coding Mus_musculus 0 2420
ENSMUST00000172620 L3mbtl2-004 retained_intron Mus_musculus 0 2183
ENSMUST00000172568 L3mbtl2-003 processed_transcript Mus_musculus 0 1472
ENSMUST00000174274 L3mbtl2-011 processed_transcript Mus_musculus 0 708
ENSMUST00000174497 L3mbtl2-008 protein_coding Mus_musculus 0 448
ENSMUST00000173607 L3mbtl2-009 processed_transcript Mus_musculus 0 412
ENSMUST00000173105 L3mbtl2-010 retained_intron Mus_musculus 0 276
ENSMUST00000173598 Chadl-003 nonsense_mediated_decay Mus_musculus 0 235
ENSDART00000026865 l3mbtl1a-201 protein_coding Danio_rerio 0.000000002 69
ENSDART00000132604 l3mbtl1a-001 protein_coding Danio_rerio 0.000000002 69

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