C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: isthmin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100593 ISM2 9606 - 14:77474394-77498850 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000216481 ISM2-002 77474394-77498816 nonsense_mediated_decay
  ENST00000342219 ISM2-001 77474397-77498850 protein_coding
  ENST00000471734 ISM2-006 77482591-77498666 nonsense_mediated_decay
  ENST00000472744 ISM2-005 77483827-77498807 retained_intron
  ENST00000480979 ISM2-004 77484400-77498758 nonsense_mediated_decay
  ENST00000487738 ISM2-007 77475840-77482899 retained_intron
  ENST00000493585 ISM2-003 77475249-77498816 protein_coding
  ENST00000554801 ISM2-008 77482496-77498816 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonLiverMuscleOvaryPlacentaTestisENST00000216481ENST00000342219ENST00000471734ENST00000487738ENST00000493585
Transcript ID Adipose Adrenal Brain Colon Liver Muscle Ovary Placenta Testis
ENST00000216481 N/A N/A N/A N/A N/A N/A 0.406±0.00 N/A N/A
ENST00000342219 N/A 0.049±0.00 0.042±0.00 0.078±0.00 N/A N/A 0.705±0.00 472.287±143.32 1.080±0.06
ENST00000471734 N/A N/A N/A 0.048±0.00 N/A N/A N/A N/A N/A
ENST00000487738 0.080±0.00 N/A N/A N/A 0.147±0.00 N/A 0.154±0.03 N/A 0.317±0.00
ENST00000493585 N/A N/A 0.208±0.00 N/A 0.122±0.00 0.014±0.00 0.108±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TX CIL_0004TX_0001 CGP 14:77457870-77498850
CIL_00064L CIL_00064L_0002 CGP 14:77474394-77616773

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053859 ism2b isthmin 2b protein_coding Danio_rerio
ENSDARG00000089691 ISM2 (2 of 2) isthmin 2 protein_coding Danio_rerio
ENSMUSG00000050671 Ism2 isthmin 2 homolog (zebrafish) protein_coding Mus_musculus

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