C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 10 (sodium/bile acid cotransporter), member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100652 SLC10A1 9606 - 14:69775417-69797289 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000216540 SLC10A1-001 69775417-69797289 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000216540
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000216540 0.134±0.00 0.105±0.01 0.266±0.19 0.019±0.00 0.055±0.01 30.439±30.43 7.285±7.08 0.029±0.00 0.019±0.01 0.041±0.02 0.050±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000U3 CIL_0000U3_0001 CGP 14:69726900-69797289
CIL_0000U1 CIL_0000U1_0001 CGP 14:69775417-70032366

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS transport
GO:0006814 IEA sodium ion transport
GO:0008206 TAS bile acid metabolic process
GO:0008508 IEA bile acid:sodium symporter activity
GO:0015125 IEA bile acid transmembrane transporter activity
GO:0015721 TAS bile acid and bile salt transport
GO:0016020 IEA membrane
GO:0016323 IEA basolateral plasma membrane
GO:0044281 TAS small molecule metabolic process
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030588 slc10a1 solute carrier family 10 (sodium/bile acid cotransporter family), member 1 protein_coding Danio_rerio
ENSMUSG00000021135 Slc10a1 solute carrier family 10 (sodium/bile acid cotransporter family), member 1 protein_coding Mus_musculus

Loading