C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 10 (sodium/bile acid cotransporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000216540 SLC10A1-001 ENSG00000100652 9606 - 14:69775417-69797289 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000216540
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000216540 0.134±0.00 0.105±0.01 0.266±0.19 0.019±0.00 0.055±0.01 30.439±30.43 7.285±7.08 0.029±0.00 0.019±0.01 0.041±0.02 0.050±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000U3 CIL_0000U3_0001 CGP 14:69726900-69797289
CIL_0000U1 CIL_0000U1_0001 CGP 14:69775417-70032366

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS transport
GO:0006814 IEA sodium ion transport
GO:0008206 TAS bile acid metabolic process
GO:0008508 IEA bile acid:sodium symporter activity
GO:0015125 IEA bile acid transmembrane transporter activity
GO:0015721 TAS bile acid and bile salt transport
GO:0016020 IEA membrane
GO:0016323 IEA basolateral plasma membrane
GO:0044281 TAS small molecule metabolic process
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000095572 Slc10a1-201 protein_coding Mus_musculus 0 918

Loading