C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000U1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100652-ENSG00000198732 CGP 9606 14:69775417-70032366
GeneTranscriptPositionBiotype
ENSG00000100652 (SLC10A1)
solute carrier family 10 (sodium/bile acid cotransporter), member 1 		ENST00000216540 (SLC10A1-001) 69775417-69797289 protein_coding
ENSG00000198732 (SMOC1)
SPARC related modular calcium binding 1 		ENST00000361956 (SMOC1-001) 69879416-70030727 protein_coding
ENST00000381280 (SMOC1-002) 69879426-70032366 protein_coding
ENST00000553839 (SMOC1-003) 69952137-69978088 retained_intron
ENST00000555917 (SMOC1-005) 69854131-69952303 processed_transcript
ENST00000557483 (SMOC1-004) 69994239-70011568 retained_intron
ENSG00000242071 (RPL7AP6)
ribosomal protein L7a pseudogene 6 		ENST00000477943 (RPL7AP6-001) 69885340-69886140 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0000U1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021135-ENSMUSG00000021136 CGP 10090 12:80953185-81186414
GeneTranscriptPositionBiotype
ENSMUSG00000021135 (Slc10a1)
solute carrier family 10 (sodium/bile acid cotransporter family), member 1 		ENSMUST00000095572 (Slc10a1-201) 80953185-80968079 protein_coding
ENSMUSG00000021136 (Smoc1)
SPARC related modular calcium binding 1 		ENSMUST00000021564 (Smoc1-002) 81026828-81186410 protein_coding
ENSMUST00000110347 (Smoc1-001) 81026808-81186414 protein_coding
ENSMUST00000129362 (Smoc1-003) 81026828-81186410 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000U1_0001ENSG00000100652ENST00000216540ENSG00000198732ENST00000361956ENST00000381280ENST00000553839ENST00000555917ENST00000557483ENSG00000242071ENST00000477943CIL_0000U1_0002ENSMUSG00000021135ENSMUST00000095572ENSMUSG00000021136ENSMUST00000021564ENSMUST00000110347ENSMUST00000129362
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000U1_0001ENSG00000100652ENST00000216540ENSG00000198732ENST00000361956ENST00000381280ENST00000557483ENSG00000242071ENST00000477943CIL_0000U1_0002ENSMUSG00000021135ENSMUST00000095572ENSMUSG00000021136ENSMUST00000021564ENSMUST00000110347ENSMUST00000129362
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100652 ENST00000216540 N/A 0.134±0.00 N/A 0.105±0.01 0.266±0.19 0.019±0.00 0.055±0.01 30.439±30.43 7.285±7.08 0.029±0.00 N/A 0.019±0.01 0.041±0.02 0.050±0.01
ENSG00000198732 ENST00000361956 1.823±0.00 0.826±0.00 N/A 0.936±0.00 N/A 0.112±0.00 0.455±0.00 2.513±0.00 9.549±0.00 0.302±0.00 1.790±0.00 3.941±4.47 6.903±1.71 9.790±0.00
ENST00000381280 1.175±0.00 N/A 0.222±0.00 12.011±10.94 0.587±0.49 0.080±0.00 0.122±0.07 3.274±2.92 25.846±0.00 N/A 0.028±0.00 5.144±4.55 2.737±0.70 12.072±0.66
ENST00000553839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557483 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.386±0.00 N/A 27.008±0.00 N/A N/A
ENSG00000242071 ENST00000477943 0.216±0.00 0.312±0.00 N/A 0.146±0.12 0.204±0.10 0.243±0.09 N/A 0.191±0.00 N/A 0.108±0.00 0.327±0.12 0.896±0.80 0.137±0.06 0.068±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021135 ENSMUST00000095572 0.097±0.05 0.514±0.13 0.117±0.01 0.127±0.03 1.122±1.11 0.099±0.07 0.125±0.09 0.270±0.09 314.706±290.02 0.164±0.12 0.032±0.01 0.178±0.07 0.094±0.03 0.088±0.02
ENSMUSG00000021136 ENSMUST00000021564 45.850±20.65 N/A 3.794±0.17 9.095±3.26 17.230±5.88 0.766±0.00 2.395±0.57 0.740±0.11 10.222±4.18 1.503±0.51 0.360±0.17 17.174±12.53 11.540±6.71 1.497±0.54
ENSMUST00000110347 6.378±1.59 88.171±57.18 0.654±0.10 3.038±0.24 20.214±5.67 0.976±0.36 0.564±0.13 0.455±0.22 6.479±4.82 1.161±0.71 0.236±0.10 19.414±9.51 4.882±3.17 N/A
ENSMUST00000129362 N/A N/A N/A N/A 11.400±4.37 0.389±0.19 0.769±0.41 0.734±0.25 6.932±0.00 0.970±0.16 0.210±0.00 13.803±4.50 N/A 1.018±0.00

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