C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier organic anion transporter family, member 4A1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101187 SLCO4A1 9606 + 20:62642445-62685785 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000217159 SLCO4A1-201 62642445-62672295 protein_coding
  ENST00000370507 SLCO4A1-006 62656359-62672293 protein_coding
  ENST00000451793 SLCO4A1-007 62667813-62672293 protein_coding
  ENST00000466818 SLCO4A1-008 62668480-62685785 processed_transcript
  ENST00000466961 SLCO4A1-003 62667741-62672154 processed_transcript
  ENST00000470412 SLCO4A1-004 62666415-62670222 processed_transcript
  ENST00000495889 SLCO4A1-001 62667478-62672607 processed_transcript
  ENST00000497209 SLCO4A1-005 62642520-62672293 nonsense_mediated_decay
  ENST00000497919 SLCO4A1-002 62668419-62670118 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000217159ENST00000370507ENST00000451793ENST00000466961ENST00000470412ENST00000495889ENST00000497209ENST00000497919
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000217159 12.312±0.00 N/A 0.327±0.00 N/A N/A 16.729±0.00 N/A 8.462±0.00 N/A 11.926±0.00 N/A 0.240±0.00 1.813±0.00 2.227±0.00
ENST00000370507 N/A N/A N/A 1.407±0.71 N/A N/A 3.470±3.41 N/A 1.555±0.00 16.688±0.00 5.109±0.00 10.901±7.51 4.605±1.62 1.096±0.00
ENST00000451793 N/A N/A 1.016±0.00 N/A N/A N/A N/A N/A 1.283±0.00 N/A N/A 1.960±0.00 1.371±0.00 N/A
ENST00000466961 N/A N/A N/A N/A N/A 11.690±0.00 N/A 14.656±0.00 0.810±0.00 N/A N/A N/A 4.342±0.00 N/A
ENST00000470412 N/A N/A N/A 1.153±0.42 0.419±0.00 N/A 0.152±0.00 N/A N/A N/A N/A 1.855±0.00 N/A 1.069±0.00
ENST00000495889 N/A N/A N/A N/A N/A N/A 0.350±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000497209 N/A 3.647±0.00 N/A 1.544±0.00 N/A N/A 2.299±0.00 5.974±0.00 0.435±0.00 N/A N/A 1.427±0.96 N/A N/A
ENST00000497919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.859±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001O5 CIL_0001O5_0001 CGP 20:62642445-62762771

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0006810 IEA transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0043252 TAS sodium-independent organic anion transport
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075948 slco4a1 solute carrier organic anion transporter family, member 4A1 protein_coding Danio_rerio
ENSMUSG00000038963 Slco4a1 solute carrier organic anion transporter family, member 4a1 protein_coding Mus_musculus

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