C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier organic anion transporter family, member 4A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000497209 SLCO4A1-005 ENSG00000101187 9606 + 20:62642520-62672293 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartKidneyLiverOvaryENST00000497209
Transcript ID Adrenal Brain Heart Kidney Liver Ovary
ENST00000497209 3.647±0.00 1.544±0.00 2.299±0.00 5.974±0.00 0.435±0.00 1.427±0.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001O5 CIL_0001O5_0001 CGP 20:62642445-62762771

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005515 IEA protein binding
GO:0006810 IEA transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038225 Slco4a1-005 protein_coding Mus_musculus 0 1105
ENSMUST00000038259 Slco4a1-001 protein_coding Mus_musculus 0 1105
ENSMUST00000139902 Slco4a1-002 processed_transcript Mus_musculus 0 573

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