C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier organic anion transporter family, member 4a1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038963 Slco4a1 10090 + 2:180456245-180474867 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038225 Slco4a1-005 180460979-180474867 protein_coding
  ENSMUST00000038259 Slco4a1-001 180456245-180474867 protein_coding
  ENSMUST00000128367 Slco4a1-003 180472429-180474852 retained_intron
  ENSMUST00000138446 Slco4a1-004 180467070-180468357 retained_intron
  ENSMUST00000139902 Slco4a1-002 180456334-180474845 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038225ENSMUST00000038259ENSMUST00000128367ENSMUST00000138446ENSMUST00000139902
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.190±0.00 0.399±0.18 N/A N/A
ENSMUST00000038259 0.410±0.24 0.092±0.00 0.523±0.43 0.313±0.04 0.812±0.19 3.237±0.80 N/A 10.519±1.78 0.592±0.14 1.220±0.44 0.017±0.01 0.745±0.45 44.413±48.86 0.212±0.18
ENSMUST00000128367 N/A N/A N/A N/A N/A N/A N/A N/A 0.098±0.00 N/A 0.040±0.01 N/A N/A 0.009±0.00
ENSMUST00000138446 N/A N/A 0.204±0.00 N/A 1.032±0.00 N/A 0.323±0.00 N/A 0.359±0.27 N/A N/A 0.152±0.00 N/A N/A
ENSMUST00000139902 0.272±0.12 0.196±0.04 0.173±0.10 0.227±0.10 0.327±0.13 1.226±0.20 0.091±0.02 6.260±1.06 0.158±0.08 0.484±0.06 0.084±0.04 0.448±0.30 6.364±6.28 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001O5 CIL_0001O5_0002 CGP 2:180456245-180544980

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005886 IEA plasma membrane
GO:0006811 IEA ion transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075948 slco4a1 solute carrier organic anion transporter family, member 4A1 protein_coding Danio_rerio
ENSG00000101187 SLCO4A1 solute carrier organic anion transporter family, member 4A1 protein_coding Homo_sapiens

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