C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001O5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101187-ENSG00000101188 CGP 9606 20:62642445-62762771
GeneTranscriptPositionBiotype
ENSG00000101187 (SLCO4A1)
solute carrier organic anion transporter family, member 4A1 		ENST00000217159 (SLCO4A1-201) 62642445-62672295 protein_coding
ENST00000370507 (SLCO4A1-006) 62656359-62672293 protein_coding
ENST00000451793 (SLCO4A1-007) 62667813-62672293 protein_coding
ENST00000466818 (SLCO4A1-008) 62668480-62685785 processed_transcript
ENST00000466961 (SLCO4A1-003) 62667741-62672154 processed_transcript
ENST00000470412 (SLCO4A1-004) 62666415-62670222 processed_transcript
ENST00000495889 (SLCO4A1-001) 62667478-62672607 processed_transcript
ENST00000497209 (SLCO4A1-005) 62642520-62672293 nonsense_mediated_decay
ENST00000497919 (SLCO4A1-002) 62668419-62670118 processed_transcript
ENSG00000101188 (NTSR1)
neurotensin receptor 1 (high affinity) 		ENST00000370501 (NTSR1-001) 62708837-62762771 protein_coding
ENST00000482259 (NTSR1-002) 62756631-62762771 processed_transcript
ENSG00000167046 (RP11-93B14.6)
 ENST00000370520 (RP11-93B14.6-001) 62640719-62643304 antisense
ENSG00000223669 (RP11-93B14.4)
 ENST00000430184 (RP11-93B14.4-001) 62732566-62735347 antisense
ENSG00000276317 (RP11-93B14.10)
 ENST00000620143 (RP11-93B14.10-001) 62651272-62652186 antisense
ENSG00000277496 (RP11-93B14.9)
 ENST00000617703 (RP11-93B14.9-001) 62648961-62650767 antisense
CIL_0001O5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038963-ENSMUSG00000027568 CGP 10090 2:180456245-180544980
GeneTranscriptPositionBiotype
ENSMUSG00000027568 (Ntsr1)
neurotensin receptor 1 		ENSMUST00000029084 (Ntsr1-001) 180499976-180544980 protein_coding
ENSMUST00000170448 (Ntsr1-201) 180500227-180544219 protein_coding
ENSMUSG00000038963 (Slco4a1)
solute carrier organic anion transporter family, member 4a1 		ENSMUST00000038225 (Slco4a1-005) 180460979-180474867 protein_coding
ENSMUST00000038259 (Slco4a1-001) 180456245-180474867 protein_coding
ENSMUST00000128367 (Slco4a1-003) 180472429-180474852 retained_intron
ENSMUST00000138446 (Slco4a1-004) 180467070-180468357 retained_intron
ENSMUST00000139902 (Slco4a1-002) 180456334-180474845 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001O5_0001ENSG00000101187ENST00000217159ENST00000370507ENST00000451793ENST00000466818ENST00000466961ENST00000470412ENST00000495889ENST00000497209ENST00000497919ENSG00000101188ENST00000370501ENST00000482259ENSG00000167046ENST00000370520ENSG00000223669ENST00000430184ENSG00000276317ENST00000620143ENSG00000277496ENST00000617703CIL_0001O5_0002ENSMUSG00000027568ENSMUST00000029084ENSMUST00000170448ENSMUSG00000038963ENSMUST00000038225ENSMUST00000038259ENSMUST00000128367ENSMUST00000138446ENSMUST00000139902
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001O5_0001ENSG00000101187ENST00000217159ENST00000370507ENST00000451793ENST00000466961ENST00000470412ENST00000495889ENST00000497209ENST00000497919ENSG00000101188ENST00000370501ENST00000482259ENSG00000167046ENST00000370520ENSG00000223669ENST00000430184ENSG00000276317ENST00000620143ENSG00000277496ENST00000617703CIL_0001O5_0002ENSMUSG00000027568ENSMUST00000029084ENSMUST00000170448ENSMUSG00000038963ENSMUST00000038225ENSMUST00000038259ENSMUST00000128367ENSMUST00000138446ENSMUST00000139902
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101187 ENST00000217159 12.312±0.00 N/A 0.327±0.00 N/A N/A 16.729±0.00 N/A 8.462±0.00 N/A 11.926±0.00 N/A 0.240±0.00 1.813±0.00 2.227±0.00
ENST00000370507 N/A N/A N/A 1.407±0.71 N/A N/A 3.470±3.41 N/A 1.555±0.00 16.688±0.00 5.109±0.00 10.901±7.51 4.605±1.62 1.096±0.00
ENST00000451793 N/A N/A 1.016±0.00 N/A N/A N/A N/A N/A 1.283±0.00 N/A N/A 1.960±0.00 1.371±0.00 N/A
ENST00000466818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466961 N/A N/A N/A N/A N/A 11.690±0.00 N/A 14.656±0.00 0.810±0.00 N/A N/A N/A 4.342±0.00 N/A
ENST00000470412 N/A N/A N/A 1.153±0.42 0.419±0.00 N/A 0.152±0.00 N/A N/A N/A N/A 1.855±0.00 N/A 1.069±0.00
ENST00000495889 N/A N/A N/A N/A N/A N/A 0.350±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000497209 N/A 3.647±0.00 N/A 1.544±0.00 N/A N/A 2.299±0.00 5.974±0.00 0.435±0.00 N/A N/A 1.427±0.96 N/A N/A
ENST00000497919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.859±0.00 N/A N/A N/A
ENSG00000101188 ENST00000370501 0.358±0.00 N/A N/A 0.163±0.08 0.166±0.00 4.365±4.12 N/A 0.053±0.00 N/A N/A N/A 0.189±0.00 N/A 0.205±0.03
ENST00000482259 N/A 0.129±0.00 0.430±0.00 0.049±0.00 N/A N/A 0.027±0.00 0.224±0.00 0.042±0.00 N/A N/A 0.269±0.16 0.036±0.01 0.078±0.03
ENSG00000167046 ENST00000370520 0.102±0.00 0.173±0.00 N/A 0.062±0.00 0.057±0.00 0.131±0.07 N/A 0.098±0.00 0.037±0.00 0.035±0.02 0.119±0.00 0.149±0.06 0.061±0.03 0.038±0.00
ENSG00000223669 ENST00000430184 N/A N/A N/A 0.031±0.00 N/A N/A N/A N/A N/A 0.374±0.00 N/A 0.619±0.47 N/A 0.162±0.00
ENSG00000276317 ENST00000620143 N/A N/A N/A 0.181±0.00 0.237±0.00 0.161±0.08 0.094±0.00 0.464±0.17 0.136±0.00 0.353±0.00 N/A 0.732±0.00 N/A 0.046±0.00
ENSG00000277496 ENST00000617703 N/A 0.898±0.00 0.081±0.00 0.116±0.00 0.448±0.34 0.504±0.04 0.164±0.05 0.532±0.00 0.520±0.02 1.296±1.02 0.045±0.00 0.552±0.24 0.478±0.00 0.150±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027568 ENSMUST00000029084 N/A N/A 0.037±0.02 0.610±0.19 N/A 0.198±0.08 0.008±0.00 N/A 0.029±0.02 N/A N/A 0.016±0.00 0.085±0.11 0.085±0.00
ENSMUST00000170448 N/A 0.015±0.00 0.013±0.00 0.311±0.08 0.009±0.00 0.487±0.26 0.020±0.00 N/A N/A N/A N/A 0.065±0.02 N/A 0.032±0.00
ENSMUSG00000038963 ENSMUST00000038225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.190±0.00 0.399±0.18 N/A N/A
ENSMUST00000038259 0.410±0.24 0.092±0.00 0.523±0.43 0.313±0.04 0.812±0.19 3.237±0.80 N/A 10.519±1.78 0.592±0.14 1.220±0.44 0.017±0.01 0.745±0.45 44.413±48.86 0.212±0.18
ENSMUST00000128367 N/A N/A N/A N/A N/A N/A N/A N/A 0.098±0.00 N/A 0.040±0.01 N/A N/A 0.009±0.00
ENSMUST00000138446 N/A N/A 0.204±0.00 N/A 1.032±0.00 N/A 0.323±0.00 N/A 0.359±0.27 N/A N/A 0.152±0.00 N/A N/A
ENSMUST00000139902 0.272±0.12 0.196±0.04 0.173±0.10 0.227±0.10 0.327±0.13 1.226±0.20 0.091±0.02 6.260±1.06 0.158±0.08 0.484±0.06 0.084±0.04 0.448±0.30 6.364±6.28 N/A

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