C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: prodynorphin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101327 PDYN 9606 - 20:1978757-1994285 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000217305 PDYN-002 1978759-1994057 protein_coding
  ENST00000539905 PDYN-201 1978757-1994285 protein_coding
  ENST00000540134 PDYN-202 1978757-1993748 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLungTestisENST00000217305ENST00000540134
Transcript ID Brain Lung Testis
ENST00000217305 2.200±1.60 0.002±0.00 N/A
ENST00000540134 0.783±0.00 0.003±0.00 1.135±0.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005HA CIL_0005HA_0001 CGP 20:1894167-1994285
CIL_0000FS CIL_0000FS_0001 CGP 20:1978757-2177038

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001515 IEA opioid peptide activity
GO:0005576 TAS extracellular region
GO:0005886 IDA plasma membrane
GO:0007218 IEA neuropeptide signaling pathway
GO:0007268 IEA synaptic transmission
GO:0008219 IEA cell death

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079395 pdyn prodynorphin protein_coding Danio_rerio
ENSDARG00000087798 pdyn prodynorphin protein_coding Danio_rerio
ENSMUSG00000027400 Pdyn prodynorphin protein_coding Mus_musculus

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