C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: prodynorphin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027400 Pdyn 10090 - 2:129686565-129699844 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028883 Pdyn-001 129686565-129699833 protein_coding
  ENSMUST00000130608 Pdyn-002 129688496-129698658 protein_coding
  ENSMUST00000152113 Pdyn-003 129697986-129699844 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000028883ENSMUST00000130608
Transcript ID Adipose Adrenal Bladder Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000028883 0.035±0.00 0.033±0.00 0.007±0.00 3.745±2.83 0.182±0.08 0.014±0.00 0.010±0.01 0.021±0.00 0.032±0.01 0.018±0.00 0.014±0.00
ENSMUST00000130608 N/A N/A N/A N/A 0.377±0.05 N/A 0.033±0.00 N/A 0.559±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005HA CIL_0005HA_0002 CGP 2:129592835-129699844
CIL_0000FS CIL_0000FS_0002 CGP 2:129686565-129832287

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001515 IEA opioid peptide activity
GO:0005184 ISS neuropeptide hormone activity
GO:0005576 IEA extracellular region
GO:0005886 IEA plasma membrane
GO:0007218 IEA neuropeptide signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079395 pdyn prodynorphin protein_coding Danio_rerio
ENSDARG00000087798 pdyn prodynorphin protein_coding Danio_rerio
ENSG00000101327 PDYN prodynorphin protein_coding Homo_sapiens

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