C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000FS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101327-ENSG00000125834 CGP 9606 20:1978757-2177038
GeneTranscriptPositionBiotype
ENSG00000101327 (PDYN)
prodynorphin
ENST00000217305 (PDYN-002) 1978759-1994057 protein_coding
ENST00000539905 (PDYN-201) 1978757-1994285 protein_coding
ENST00000540134 (PDYN-202) 1978757-1993748 protein_coding
ENSG00000125834 (STK35)
serine/threonine kinase 35
ENST00000381482 (STK35-001) 2101611-2148555 protein_coding
ENST00000493263 (STK35-003) 2102891-2177038 nonsense_mediated_decay
ENSG00000227663 (RPL7P2)
ribosomal protein L7 pseudogene 2
ENST00000427639 (RPL7P2-001) 2075555-2075822 processed_pseudogene
ENSG00000233896 (RP4-684O24.5)
ENST00000446562 (RP4-684O24.5-001) 1947246-2007517 antisense
CIL_0000FS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027400-ENSMUSG00000037885 CGP 10090 2:129686565-129832287
GeneTranscriptPositionBiotype
ENSMUSG00000027400 (Pdyn)
prodynorphin
ENSMUST00000028883 (Pdyn-001) 129686565-129699833 protein_coding
ENSMUST00000130608 (Pdyn-002) 129688496-129698658 protein_coding
ENSMUST00000152113 (Pdyn-003) 129697986-129699844 retained_intron
ENSMUSG00000037885 (Stk35)
serine/threonine kinase 35
ENSMUST00000165413 (Stk35-001) 129800517-129828974 protein_coding
ENSMUST00000166282 (Stk35-002) 129800517-129832287 protein_coding
ENSMUSG00000083589 (Gm14043)
predicted gene 14043
ENSMUST00000117151 (Gm14043-001) 129773696-129773923 processed_pseudogene
ENSMUSG00000084328 (Gm14046)
predicted gene 14046
ENSMUST00000119389 (Gm14046-001) 129749901-129750409 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000FS_0001ENSG00000101327ENST00000217305ENST00000539905ENST00000540134ENSG00000125834ENST00000381482ENST00000493263ENSG00000227663ENST00000427639ENSG00000233896ENST00000446562CIL_0000FS_0002ENSMUSG00000027400ENSMUST00000028883ENSMUST00000130608ENSMUST00000152113ENSMUSG00000037885ENSMUST00000165413ENSMUST00000166282ENSMUSG00000083589ENSMUST00000117151ENSMUSG00000084328ENSMUST00000119389
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000FS_0001ENSG00000101327ENST00000217305ENST00000540134ENSG00000125834ENST00000381482ENST00000493263ENSG00000227663ENST00000427639ENSG00000233896ENST00000446562CIL_0000FS_0002ENSMUSG00000027400ENSMUST00000028883ENSMUST00000130608ENSMUSG00000037885ENSMUST00000165413ENSMUST00000166282ENSMUSG00000083589ENSMUST00000117151ENSMUSG00000084328ENSMUST00000119389
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101327 ENST00000217305 N/A N/A N/A 2.200±1.60 N/A N/A N/A N/A N/A 0.002±0.00 N/A N/A N/A N/A
ENST00000539905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540134 N/A N/A N/A 0.783±0.00 N/A N/A N/A N/A N/A 0.003±0.00 N/A N/A N/A 1.135±0.62
ENSG00000125834 ENST00000381482 4.691±0.00 6.398±0.00 0.883±0.00 5.408±2.87 5.301±3.02 3.310±1.60 1.989±1.45 2.879±1.10 2.076±1.11 2.426±1.53 1.292±0.39 6.120±3.49 2.441±1.40 15.980±2.12
ENST00000493263 N/A N/A N/A N/A 1.291±0.00 0.878±0.00 N/A 1.274±0.00 1.257±0.00 1.721±0.00 N/A N/A N/A N/A
ENSG00000227663 ENST00000427639 0.107±0.00 0.055±0.00 N/A N/A 0.054±0.00 N/A N/A N/A N/A N/A 0.047±0.00 N/A N/A N/A
ENSG00000233896 ENST00000446562 0.011±0.00 N/A N/A N/A N/A N/A 0.129±0.00 0.075±0.00 N/A N/A N/A 0.040±0.00 0.039±0.00 0.027±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027400 ENSMUST00000028883 0.035±0.00 0.033±0.00 0.007±0.00 3.745±2.83 N/A 0.182±0.08 N/A 0.014±0.00 0.010±0.01 0.021±0.00 N/A 0.032±0.01 0.018±0.00 0.014±0.00
ENSMUST00000130608 N/A N/A N/A N/A N/A 0.377±0.05 N/A N/A 0.033±0.00 N/A N/A 0.559±0.00 N/A N/A
ENSMUST00000152113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037885 ENSMUST00000165413 N/A N/A N/A 1.971±0.00 N/A N/A N/A N/A 1.929±0.00 N/A 0.853±0.00 N/A 1.346±0.50 34.715±11.99
ENSMUST00000166282 4.327±0.63 8.613±3.44 7.421±0.11 6.033±0.68 5.552±0.90 9.147±1.42 2.136±0.64 4.443±0.89 2.571±0.90 6.941±0.93 0.417±0.15 12.200±3.71 2.416±1.59 17.971±0.92
ENSMUSG00000083589 ENSMUST00000117151 0.902±0.10 1.601±0.14 N/A 1.856±0.65 1.139±0.00 1.072±0.00 N/A 0.525±0.00 0.296±0.12 1.505±0.00 0.333±0.00 2.564±0.58 0.183±0.00 1.011±0.64
ENSMUSG00000084328 ENSMUST00000119389 0.096±0.00 N/A 0.022±0.00 0.155±0.13 N/A N/A N/A N/A 0.059±0.05 N/A N/A 0.108±0.01 0.197±0.11 N/A

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