C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ARP5 actin-related protein 5 homolog (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101442 ACTR5 9606 + 20:38748442-38772520 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000243903 ACTR5-001 38748442-38772520 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000243903
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000243903 1.736±0.00 3.356±0.00 0.518±0.00 1.219±0.12 1.203±0.00 0.678±0.45 0.887±0.00 1.485±1.36 0.890±0.68 0.922±0.00 1.360±1.04 3.431±0.78 1.837±0.27 6.652±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081Y CIL_00081Y_0001 VISTA 20:38219747-38821106
CIL_0004NU CIL_0004NU_0001 CGP 20:38724462-38772520
CIL_0004EB CIL_0004EB_0001 CGP 20:38748442-38923024

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006302 IMP double-strand break repair
GO:0006310 IEA DNA recombination
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0031011 IDA Ino80 complex
GO:0070914 IMP UV-damage excision repair

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012995 actr5 ARP5 actin-related protein 5 homolog protein_coding Danio_rerio
ENSMUSG00000037761 Actr5 ARP5 actin-related protein 5 protein_coding Mus_musculus

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