C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004EB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101442-ENSG00000101445 CGP 9606 20:38748442-38923024
GeneTranscriptPositionBiotype
ENSG00000101442 (ACTR5)
ARP5 actin-related protein 5 homolog (yeast)
ENST00000243903 (ACTR5-001) 38748442-38772520 protein_coding
ENSG00000101445 (PPP1R16B)
protein phosphatase 1, regulatory subunit 16B
ENST00000299824 (PPP1R16B-001) 38805705-38923024 protein_coding
ENST00000373331 (PPP1R16B-004) 38805724-38923024 protein_coding
ENST00000463749 (PPP1R16B-003) 38838448-38895698 processed_transcript
ENST00000468265 (PPP1R16B-002) 38836116-38895646 processed_transcript
ENSG00000199691 (RN7SKP173)
RNA, 7SK small nuclear pseudogene 173
ENST00000362821 (RN7SKP173-201) 38761528-38761842 misc_RNA
ENSG00000240474 (RN7SL116P)
RNA, 7SL, cytoplasmic 116, pseudogene
ENST00000470786 (RN7SL116P-201) 38872770-38873074 misc_RNA
CIL_0004EB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037761-ENSMUSG00000037754 CGP 10090 2:158624888-158766334
GeneTranscriptPositionBiotype
ENSMUSG00000037754 (Ppp1r16b)
protein phosphatase 1, regulatory (inhibitor) subunit 16B
ENSMUST00000045503 (Ppp1r16b-002) 158667119-158766334 protein_coding
ENSMUST00000052927 (Ppp1r16b-001) 158665398-158766334 protein_coding
ENSMUST00000103116 (Ppp1r16b-201) 158666733-158766334 protein_coding
ENSMUST00000129902 (Ppp1r16b-003) 158665398-158759334 retained_intron
ENSMUST00000145073 (Ppp1r16b-004) 158696135-158766334 protein_coding
ENSMUSG00000037761 (Actr5)
ARP5 actin-related protein 5
ENSMUST00000045644 (Actr5-001) 158624888-158639211 protein_coding
ENSMUST00000125390 (Actr5-005) 158624888-158629157 retained_intron
ENSMUST00000142531 (Actr5-004) 158624888-158639198 retained_intron
ENSMUST00000183586 (Actr5-003) 158631629-158636697 processed_transcript
ENSMUST00000183731 (Actr5-002) 158624888-158639198 nonsense_mediated_decay
ENSMUSG00000093040 (Gm26141)
predicted gene, 26141
ENSMUST00000175299 (Gm26141-201) 158740138-158740263 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004EB_0001ENSG00000101442ENST00000243903ENSG00000101445ENST00000299824ENST00000373331ENST00000463749ENST00000468265ENSG00000199691ENST00000362821ENSG00000240474ENST00000470786CIL_0004EB_0002ENSMUSG00000037754ENSMUST00000045503ENSMUST00000052927ENSMUST00000103116ENSMUST00000129902ENSMUST00000145073ENSMUSG00000037761ENSMUST00000045644ENSMUST00000125390ENSMUST00000142531ENSMUST00000183586ENSMUST00000183731ENSMUSG00000093040ENSMUST00000175299
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004EB_0001ENSG00000101442ENST00000243903ENSG00000101445ENST00000299824ENST00000373331ENSG00000199691ENST00000362821ENSG00000240474ENST00000470786CIL_0004EB_0002ENSMUSG00000037754ENSMUST00000045503ENSMUST00000052927ENSMUST00000103116ENSMUST00000129902ENSMUST00000145073ENSMUSG00000037761ENSMUST00000045644ENSMUST00000142531ENSMUST00000183586ENSMUST00000183731ENSMUSG00000093040ENSMUST00000175299
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101442 ENST00000243903 1.736±0.00 3.356±0.00 0.518±0.00 1.219±0.12 1.203±0.00 0.678±0.45 0.887±0.00 1.485±1.36 0.890±0.68 0.922±0.00 1.360±1.04 3.431±0.78 1.837±0.27 6.652±0.00
ENSG00000101445 ENST00000299824 7.998±0.00 6.983±0.00 4.198±0.00 18.237±3.98 3.560±0.00 1.942±1.17 0.748±0.42 N/A 0.507±0.00 2.849±2.00 N/A 0.436±0.21 1.057±0.05 0.258±0.07
ENST00000373331 N/A N/A N/A N/A 1.173±0.00 N/A 0.749±0.00 0.814±0.36 0.229±0.10 N/A 0.056±0.03 0.236±0.00 0.722±0.45 N/A
ENST00000463749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000199691 ENST00000362821 N/A 0.797±0.00 N/A 0.130±0.00 0.190±0.00 1.039±0.00 N/A 0.312±0.00 N/A 0.119±0.00 N/A 2.603±3.03 N/A 0.222±0.00
ENSG00000240474 ENST00000470786 N/A 0.784±0.00 3.878±0.00 0.603±0.22 2.412±0.00 0.470±0.00 0.077±0.00 N/A N/A 0.609±0.00 N/A 0.314±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037754 ENSMUST00000045503 1.844±0.43 1.773±0.69 0.619±0.19 7.995±9.19 4.727±2.44 0.772±0.41 1.407±0.10 6.946±1.14 0.249±0.09 21.755±1.08 0.501±0.16 3.812±0.62 0.751±0.41 0.602±0.29
ENSMUST00000052927 N/A N/A N/A N/A N/A 0.172±0.00 N/A N/A N/A N/A N/A 1.160±0.00 0.094±0.00 0.088±0.00
ENSMUST00000103116 0.796±0.45 0.975±0.51 N/A 0.332±0.00 1.393±0.35 0.519±0.37 0.183±0.00 2.772±0.97 0.154±0.18 N/A 0.382±0.00 1.206±0.32 0.730±0.66 0.598±0.28
ENSMUST00000129902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.084±0.00
ENSMUST00000145073 N/A N/A N/A N/A 1.533±0.00 0.434±0.00 N/A 1.202±0.00 0.175±0.10 N/A 0.368±0.16 1.882±0.26 0.279±0.08 0.180±0.01
ENSMUSG00000037761 ENSMUST00000045644 1.261±0.29 1.232±0.00 1.303±0.12 2.639±0.23 1.498±0.54 1.454±0.39 0.603±0.29 1.490±0.27 1.395±0.77 1.762±0.79 0.698±0.30 2.158±0.81 2.194±0.56 2.058±0.31
ENSMUST00000125390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142531 1.086±0.40 2.066±0.41 1.520±0.31 1.402±0.00 1.710±0.62 1.233±0.45 0.582±0.13 0.779±0.26 0.721±0.28 1.768±0.12 0.247±0.08 2.229±0.73 1.178±0.11 1.090±0.15
ENSMUST00000183586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.654±0.00 N/A
ENSMUST00000183731 N/A 0.553±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000093040 ENSMUST00000175299 1026.430±0.00 N/A N/A 1.432±0.00 786.460±0.00 1150.230±0.00 N/A 1026.240±0.00 N/A 550.166±0.00 N/A N/A N/A N/A

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